Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1483 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score = 2001 bits (5185), Expect = 0.0
 Identities = 991/1486 (66%), Positives = 1179/1486 (79%), Gaps = 4/1486 (0%)

Query: 1    MALYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLL 60
            M+LY PS E+DNCGFGLIA M+G+ASH++VRTAI+ LDRM HRGGIAADG+TGDGCGLL+
Sbjct: 1    MSLYHPSFERDNCGFGLIAQMDGEASHRIVRTAITGLDRMKHRGGIAADGRTGDGCGLLM 60

Query: 61   QKPDSYLRLIAEEQHWKLSKQYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKV 120
            Q P  +   IA E  W LS+++A+GM FLS+D  K   A+ ++ +EL KETL +AGWR+V
Sbjct: 61   QLPIKFFESIAAENDWHLSRKFAVGMFFLSQDEEKVAAARFVLERELEKETLCIAGWREV 120

Query: 121  PTNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDRDFYICSL 180
            P NP VLG I   SLP I QV I+AP GWRE+D+ERRLY+ARRR+E+Q+T D DFY+ SL
Sbjct: 121  PVNPDVLGEIGKASLPRIVQVLINAPIGWREKDLERRLYMARRRLEQQMTADPDFYVASL 180

Query: 181  STQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNG 240
            S QV+VYKGL MPADLP FY DLADLR+ESAICLFHQRFSTNT P+WPLAQPFRYLAHNG
Sbjct: 181  SGQVIVYKGLMMPADLPAFYPDLADLRLESAICLFHQRFSTNTSPKWPLAQPFRYLAHNG 240

Query: 241  EINTIEGNRQWARARAYKFASPLLPDLQSAAPFVNETGSDSSSLDNMLDLFLAGGMDIFR 300
            EINTI GNRQWARARAYKF SPLLPDLQ AAPFVNETGSDSSSLDNML++ L+GGMD++R
Sbjct: 241  EINTITGNRQWARARAYKFNSPLLPDLQQAAPFVNETGSDSSSLDNMLEMLLSGGMDLYR 300

Query: 301  AMRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPA 360
            AMR+L+PPAWQ++P+MD +L+AFYDFNS HMEPWDGPAGIV+++GR+AAC +DRNGLRP+
Sbjct: 301  AMRLLIPPAWQSNPEMDEELKAFYDFNSMHMEPWDGPAGIVMTNGRHAACAVDRNGLRPS 360

Query: 361  RYVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLKSR 420
            RYVITKD+++TLASEVGIWDY PDEV EKGRVGPGELLV+DT  G+++QS EIDNDLK R
Sbjct: 361  RYVITKDRILTLASEVGIWDYQPDEVVEKGRVGPGELLVLDTLNGRLYQSFEIDNDLKRR 420

Query: 421  HPYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLGDMA 480
            HPY+EWM  N   L    ++  ++ G   F  D L  YQK F  S EE++Q++ VL    
Sbjct: 421  HPYKEWMAKNSRTLKSAEEMSSEQHGASEFSRDTLLQYQKLFGYSREELEQVIWVLASQG 480

Query: 481  QEAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMNV 540
            +EAVGSMGDDTPMAVLS+K+R + DYFRQKFAQVTNPPIDPLREKHVMSLAT +G+E N+
Sbjct: 481  EEAVGSMGDDTPMAVLSNKQRSLYDYFRQKFAQVTNPPIDPLREKHVMSLATCVGREQNL 540

Query: 541  FCETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVLDLCDK 600
            F ET GHA+RV F+SP+LL+SD  QL++L   +YR  I+D+N+DP E  L+ A+  + D 
Sbjct: 541  FNETTGHAYRVMFNSPVLLFSDFNQLMSLDKAYYRANIVDLNYDPAE-GLEGAIRRITDD 599

Query: 601  AEQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETGAARDP 660
            AE++ R GT L+VLSDRA+  +R  IPAAMAVGAVQ  LV  +LRCD NII+ET +ARDP
Sbjct: 600  AERLARTGTTLLVLSDRAVAKNRQVIPAAMAVGAVQQMLVSKSLRCDTNIIVETASARDP 659

Query: 661  HHFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYGINKGLYKIMSKMGI 720
            HHFAVL+GFGATA+YPYL YE++  +            +M N++YGI KGL KIMSKMGI
Sbjct: 660  HHFAVLLGFGATAIYPYLVYESIADLAKRNDSADDMVALMLNFRYGIEKGLRKIMSKMGI 719

Query: 721  STVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAWAKRKPLE 780
            STVASYRCSQ FEA+GL RDV++LCFKGV +RI+G +FD   +D   L + A+     L+
Sbjct: 720  STVASYRCSQQFEAIGLARDVIELCFKGVVSRIEGVSFDHLAKDQHKLHQAAFRPHVSLQ 779

Query: 781  HGGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRDLLRLKTS 840
             GGLLKYV GGEYHA+NPDVV TLQ ++ S +   Y+ FA+ V++RPVAMLRDLL +K +
Sbjct: 780  QGGLLKYVEGGEYHAFNPDVVNTLQASLISRDYSKYKAFAKHVDERPVAMLRDLLGVKGT 839

Query: 841  DKPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRF 900
               +P + +E A++LY RFDSAAMSIGALSPEAHEALA AMNRLGG SNSGEGGEDPRRF
Sbjct: 840  LDAIPADTVEAAANLYPRFDSAAMSIGALSPEAHEALAIAMNRLGGRSNSGEGGEDPRRF 899

Query: 901  GTERNSRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYS 960
            GTE+NS IKQ+ASGRFGVT HYL NA+VLQIKVAQGAKPGEGGQLPGHKV+ EIA LRY+
Sbjct: 900  GTEKNSAIKQIASGRFGVTAHYLINAEVLQIKVAQGAKPGEGGQLPGHKVSVEIAGLRYA 959

Query: 961  VPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVGTIATGVAKAYAD 1020
             PGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKAL+SVKLVSEPG+GTIATGVAKAYAD
Sbjct: 960  RPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALISVKLVSEPGIGTIATGVAKAYAD 1019

Query: 1021 LITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDV 1080
            +IT+SGYDGGT ASPLTSVKYAGSPWELGLAE  QALV NGLRHKIRLQVDGGLKTG DV
Sbjct: 1020 MITVSGYDGGTGASPLTSVKYAGSPWELGLAEVHQALVDNGLRHKIRLQVDGGLKTGTDV 1079

Query: 1081 IKGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKDYFKGLPEMVMNY 1140
            IK A+LGAESFGFGT PM+A+GCK+LRICHLNNCATGVATQD+ LR  +F GLPE VM Y
Sbjct: 1080 IKAALLGAESFGFGTVPMIALGCKYLRICHLNNCATGVATQDKNLRDKHFHGLPERVMTY 1139

Query: 1141 FKGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDLLEAPVSPQNLPL 1200
            F+ +AEEVR ++A LGV K  DL+GR+D L  + G T KQ  LDLS +L  P        
Sbjct: 1140 FEFVAEEVREWMARLGVAKFEDLVGRSDWLYALAGQTEKQHGLDLSPILYQPQVRAGSSR 1199

Query: 1201 YCTEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGARLSGEIAKRYGNL 1260
               E N P D G LNQ++++DA  A+   +     Y++ NTDRS+GA LSG IA   G  
Sbjct: 1200 TWKEINPPTDTGELNQRLLKDAADAISRGEGFSAAYSINNTDRSVGAALSGHIAACCGLK 1259

Query: 1261 GVATSPIKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKIVIRPHQGTAFVC 1320
            G   +P+ +  NGTAGQSFGVWNA GLE+ L GDANDYVGKGM+GGK+ I P  G+AF  
Sbjct: 1260 G-TKAPVSLSFNGTAGQSFGVWNAPGLEMSLCGDANDYVGKGMSGGKLSIYPPLGSAFQS 1318

Query: 1321 NEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNACEYMTGGIVAILG 1380
                I+GNTCLYGATGG+ FAAG+AGERF VRNSG +AV+EG GDN CEYMTGGIV +LG
Sbjct: 1319 ERTAIVGNTCLYGATGGQFFAAGQAGERFGVRNSGAVAVVEGLGDNGCEYMTGGIVVVLG 1378

Query: 1381 ATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTDLYIHQEHLRGLIAEHLEETG 1440
             TGVNFGAGMTGGFAYV D+ G F  RVN E V+   + +  IHQ+HL+GLI  H++ETG
Sbjct: 1379 KTGVNFGAGMTGGFAYVFDQFGRFGRRVNTEMVDTQKV-ESAIHQKHLKGLIEAHVKETG 1437

Query: 1441 SAHAERILANFDEWIPKFYLIKPQAADLRTLLGHQSRSAAELRVQA 1486
            S HA  IL++FD W+  F L+KP+   +  LL  +  S  EL V+A
Sbjct: 1438 SEHARAILSDFDNWLDCFVLVKPKNVAVADLLKLEQPS-PELAVKA 1482