Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1524 a.a., Glutamate synthase (ferredoxin) (NCBI) from Rhodospirillum rubrum S1H

 Score = 1169 bits (3023), Expect = 0.0
 Identities = 654/1476 (44%), Positives = 889/1476 (60%), Gaps = 22/1476 (1%)

Query: 4    YDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQKP 63
            YDP+ E  +CG GL+A + G+    +V   I AL  + HRG + ADGKTGDG G+ ++ P
Sbjct: 36   YDPAHEHSSCGVGLVASINGKPRRSVVEAGIQALKVLFHRGAVDADGKTGDGAGIHVEIP 95

Query: 64   DSYLRL-IAEEQHWKLSKQYAIGMLFLSRDPHKAQ-LAQQIVNQELAKETLSVAGWRKVP 121
              + +  I    H   + + A+GM+FL +    AQ + + IV  E+     S+ GWR+VP
Sbjct: 96   QDFFKEHIRRTTHEPRAGRVAVGMVFLPKTDLNAQEVCRTIVESEILSFGYSIYGWRQVP 155

Query: 122  TNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDR--DFYICS 179
             +  V+G  A  + P+I+Q+ I+   G  +   ER LY+ RRRIEK        + YICS
Sbjct: 156  VDTSVIGEKANATRPEIEQIMIANTRGGDDEQFERDLYVIRRRIEKHALASNVGELYICS 215

Query: 180  LSTQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHN 239
            LS + ++YKG+ +   L  FY DL D R  S+  ++HQR+STNT P W LAQPFR LAHN
Sbjct: 216  LSCRSIIYKGMFLAEQLTSFYPDLLDERFISSFAIYHQRYSTNTFPTWRLAQPFRMLAHN 275

Query: 240  GEINTIEGNRQWARARAYKFASPLLPD-LQSAAPFVNETGSDSSSLDNMLDLFLAGGMDI 298
            GEINT+ GN  W +A   +  SP   + ++   P V   GSDS++LD + +L    G   
Sbjct: 276  GEINTLTGNINWMKAHETRMDSPFFAEVIEDLKPVVQPGGSDSAALDGVFELLCRAGRPA 335

Query: 299  FRAMRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLR 358
                 M++P +   +  M    +A   + +  MEPWDGPA I  +DGR+    LDRNGLR
Sbjct: 336  PMVKAMVIPESLTQNALMPDHHKALIGYCNCVMEPWDGPAAIAATDGRWVVAGLDRNGLR 395

Query: 359  PARYVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLK 418
            P R+ IT D L+ + SE G+      ++  KGR+GPG ++ +D R+G++++  EI + L 
Sbjct: 396  PMRFTITTDGLLIVGSETGMVRVPESDILRKGRLGPGGMVAVDLREGRLYEDGEIKDVLA 455

Query: 419  SRHPYREWMENNVHKLTPFS-QLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLG 477
            +R PY EW    V K+T    Q+  D V   +   + L   Q     S E+++ IL  + 
Sbjct: 456  AREPYAEW----VGKITELEGQIGTDVVEPATLSTEDLCRRQLACGQSMEDLELILHPMV 511

Query: 478  DMAQEAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQE 537
              A+EA+GSMGDD P+AVLSS  R +  +FRQ F+QVTNPPID LRE  VMSL T +G  
Sbjct: 512  ADAKEALGSMGDDAPLAVLSSHYRALHHFFRQNFSQVTNPPIDALRETRVMSLKTRLGNL 571

Query: 538  MNVFCETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVLDL 597
             N+  E       +  +SP+L  ++ + +     +         + D     L+ A++ +
Sbjct: 572  GNILDEDASQCDLLQLESPVLTTAEFEAMRRSMGETVAEVDCTFSPDGGPTGLRDAIVRV 631

Query: 598  CDKAEQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETGAA 657
              +AE+ VR G   VVL+D AL+A R+ IP  +A GAV   L+   LR   ++ +     
Sbjct: 632  QQEAEEAVRGGCTHVVLTDTALSATRVAIPMILAAGAVHTHLIREQLRTFTSLNVRCAEV 691

Query: 658  RDPHHFAVLIGFGATAVYPYLAYETLGKMIDDGALQK--SYREVMQNYQYGINKGLYKIM 715
             D H+FAVLIG GAT V P+LA E++   +  G   +  +    M+ ++  +N+GL KIM
Sbjct: 692  LDVHYFAVLIGVGATTVNPWLAQESIADRLRRGLFDEGVTLEAAMKRFKKAVNEGLLKIM 751

Query: 716  SKMGISTVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAW-A 774
            SKMGIS ++SYR    FEA+GL R +V   F  +T+RI G      ++ +     KA+ A
Sbjct: 752  SKMGISVISSYRGGCNFEAIGLSRSLVAEYFPSLTSRISGIGLAGIQKKVLEQHAKAFGA 811

Query: 775  KRKPLEHGGLLKY-VHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRD 833
                L  GG  +    GGE H ++ D++ TLQ+AV +     ++++   + + P   +RD
Sbjct: 812  AAVVLPVGGFYRVRKQGGEAHHFDGDLIHTLQQAVATDSYQTFKKYTAGLRKLPPITIRD 871

Query: 834  LLRLKTSDKPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEG 893
            LL  K     + +E +E  + + +RF + AMS+GALSPEAH  L  AMNR+G  S+SGEG
Sbjct: 872  LLDFKPGTTGVSIEEVESITSIRRRFVTPAMSLGALSPEAHGTLNIAMNRIGAKSDSGEG 931

Query: 894  GEDPRRF-----GTERNSRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGH 948
            GE   R+     G   NS IKQVASGRFGVT  YL     ++IKVAQGAKPGEGGQLPG 
Sbjct: 932  GEVRERYKPAANGDNANSAIKQVASGRFGVTAEYLNQCREIEIKVAQGAKPGEGGQLPGF 991

Query: 949  KVTAEIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVG 1008
            KVT  IAKLR+S PGV LISPPPHHDIYSIEDLAQLI+DLKQINP+A V VKLVS  G+G
Sbjct: 992  KVTEMIAKLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPRAKVCVKLVSRSGIG 1051

Query: 1009 TIATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRL 1068
            TIA GVAKA AD+I ISG+ GGT ASP TS+K+AG PWE+GLAE  Q L  N LRH++ L
Sbjct: 1052 TIAAGVAKANADVILISGHSGGTGASPQTSIKHAGLPWEIGLAEVHQVLTLNRLRHRVTL 1111

Query: 1069 QVDGGLKTGLDVIKGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKD 1128
            + DGG+K G DV+  A+LGAE +G GT  +VAMGC  +R CH N C  GV TQD+ LR  
Sbjct: 1112 RTDGGIKCGRDVVIAAMLGAEEYGIGTTSLVAMGCIMVRQCHSNTCPVGVCTQDDDLRAK 1171

Query: 1129 YFKGLPEMVMNYFKGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDL 1188
             F G  E V+N F  +AEEV+  LA LG+  L +++GRTDLL+ V         LDL+ +
Sbjct: 1172 -FTGTAEKVVNLFSFMAEEVKEILASLGMRSLDEVVGRTDLLQQVSRGADHLDDLDLNPI 1230

Query: 1189 LEAPVSPQNLPLYCTEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGAR 1248
            L  P +    P  CT          L+ +++ DA +A+++ + ++L Y V NT R+IG +
Sbjct: 1231 LVQPDTGSG-PNICTMEGRNEVPETLDAQMIADAKSALDDGEKMQLTYTVRNTHRAIGTK 1289

Query: 1249 LSGEIAKRYGNLGVATSPIKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKI 1308
            LS  I  +YG  G+    I V L G+ GQS G +   GL+L + GD+NDYVGKG++GG I
Sbjct: 1290 LSHRIVIKYGMTGLEPGHITVRLRGSCGQSLGAFAVQGLKLEVFGDSNDYVGKGLSGGTI 1349

Query: 1309 VIRPHQGTAFVCNEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNAC 1368
            V+RP   +    NE TIIGNT LYGAT GKLFAAG+AGERFAVRNSG   V+EG G N C
Sbjct: 1350 VVRPAVSSPLQTNENTIIGNTVLYGATSGKLFAAGQAGERFAVRNSGAQVVVEGCGSNGC 1409

Query: 1369 EYMTGGIVAILGATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTDLYIHQEHL 1428
            EYMT G V ILG  G NFGAGMTGG A+V D    F  RVN +SV    + ++  +   L
Sbjct: 1410 EYMTNGTVVILGQVGANFGAGMTGGMAFVYDPQNTFPLRVNPDSVIWQRI-EVPHYAGVL 1468

Query: 1429 RGLIAEHLEETGSAHAERILANFDEWIPKFYLIKPQ 1464
            R LIAEH+ ET S +AE +LA++   I  F+ I P+
Sbjct: 1469 RDLIAEHVSETQSKYAEHLLADWGREIGNFWQIVPK 1504