Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1510 a.a., glutamate synthase [NADPH] large chain from Phaeobacter inhibens DSM 17395

 Score = 1148 bits (2969), Expect = 0.0
 Identities = 649/1476 (43%), Positives = 877/1476 (59%), Gaps = 23/1476 (1%)

Query: 3    LYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLLQK 62
            LY    E  +CG GL+  + G+ S K+V   I AL  + HRG + ADG TGDG G+ +Q 
Sbjct: 24   LYAEEEEHSSCGVGLVVSVNGKRSRKVVEAGIDALKAIWHRGAVDADGMTGDGAGIHVQI 83

Query: 63   PDSYLR-LIAEEQHWKLSKQY-AIGMLFLSRDPHKAQ-LAQQIVNQELAKETLSVAGWRK 119
            P  +    +    H     Q  A+G +FL R    AQ   + IV  E+ +    + GWR 
Sbjct: 84   PAPFFYDQVRRTGHEPREDQLMAVGQVFLPRTDFGAQERCRTIVESEVLRMGYYIYGWRH 143

Query: 120  VPTNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDR--DFYI 177
            VP +   LG  A  + P+I+Q+ IS   G  E   ER LY+ RRRIEK     +    YI
Sbjct: 144  VPVDVTCLGEKANATRPEIEQILISNSKGVDEETFERELYVIRRRIEKAAAAAQVGQLYI 203

Query: 178  CSLSTQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLA 237
             SLS + ++YKG+ +   +  FY DL D R ESA  ++HQR+STNT P+W LAQPFR LA
Sbjct: 204  ASLSCRSIIYKGMMLAEQVAVFYPDLMDERFESAFAIYHQRYSTNTFPQWWLAQPFRMLA 263

Query: 238  HNGEINTIEGNRQWARARAYKFASPLLPDL-QSAAPFVNETGSDSSSLDNMLDLFLAGGM 296
            HNGEINT++GN  W ++   + AS    D  +   P V    SDS++LD++ ++ +  G 
Sbjct: 264  HNGEINTLKGNMNWMKSHEIRMASSTFGDYAEDIKPIVASGSSDSAALDSVFEVLVRAGR 323

Query: 297  DIFRAMRMLVPPAWQNHP-DMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRN 355
                A  M+VP +W     ++    R  Y + +  MEPWDGPA + ++DGR+    LDRN
Sbjct: 324  SAPMAKTMMVPESWSKQAVELPQAWRDMYSYCNSVMEPWDGPAALAMTDGRWVCAGLDRN 383

Query: 356  GLRPARYVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDN 415
            GLRP RYV+T D L+   SE G+       V EKG +GPG++L +D +KGK++  + I N
Sbjct: 384  GLRPMRYVVTGDGLVIAGSEAGMVPIDEATVVEKGALGPGQMLAVDMKKGKLFHDTAIKN 443

Query: 416  DLKSRHPYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRV 475
             L S  P+ +W    V K+            +  F  D L+  Q     + EE++QIL  
Sbjct: 444  KLASALPFGDW----VKKINDLDSTLATATEKPLFSGDELRRRQIAAGYTIEELEQILAP 499

Query: 476  LGDMAQEAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIG 535
            + +  +E + SMGDDTP AVLS   R +S +FRQ F+QVTNPPID LRE  VMSL T  G
Sbjct: 500  MAEDGKETLASMGDDTPSAVLSKMYRPLSHFFRQNFSQVTNPPIDSLREYRVMSLKTRFG 559

Query: 536  QEMNVFCETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVL 595
               NV  E       +  +SP +  S   +L+   +       +D +F P + +L  A+ 
Sbjct: 560  NLKNVLDEDSSQTEIIVLESPFVGNSQWDELVQNLNAPLAE--IDCSFAPGQGSLNAALA 617

Query: 596  DLCDKAEQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETG 655
             +  +AE+ V  G   +VL+D+     R+ +P  +A  AV + L    LR   ++ + + 
Sbjct: 618  RIRAEAEEAVSSGAGHIVLTDQHSGEGRVAMPMILATSAVHSHLTRKGLRTFCSLNVRSA 677

Query: 656  AARDPHHFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYGINKGLYKIM 715
               DPH+FAVLIG GAT V  YLA ++L   ID G L  +  E +  Y+  I++GL KIM
Sbjct: 678  ECIDPHYFAVLIGCGATVVNAYLAEDSLADRIDRGLLDGNLTENVARYREAIDQGLLKIM 737

Query: 716  SKMGISTVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAWAK 775
            +KMGIS ++SYR    FEAVGL R +    F G+T+RI G      +  L  +  KAW  
Sbjct: 738  AKMGISVISSYRGGLNFEAVGLSRAMCAEFFPGMTSRISGIGVTGIQSKLEEIHAKAWDN 797

Query: 776  RKP-LEHGGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRDL 834
             +  L  GG  K    GE HA+    +  +Q A        +++++ ++   P   LRDL
Sbjct: 798  GQDVLPIGGFYKARKSGETHAWEATSMHMMQMACNRASFELWKQYSAKMQSNPPIHLRDL 857

Query: 835  LRLKTSDKPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEGG 894
            L++K   + +P+E +E  + + KRF +  MS+GALSPEAH+ L  AMNR+G  S+SGEGG
Sbjct: 858  LQIKPMGEAVPIEEVESITSIRKRFVTPGMSLGALSPEAHKTLNVAMNRIGAKSDSGEGG 917

Query: 895  EDPRRFGTERN-----SRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHK 949
            EDP  F  E N     ++IKQVASGRFGVT  YL   + L+IKVAQGAKPGEGGQLPG K
Sbjct: 918  EDPAHFVPEPNGDNPSAKIKQVASGRFGVTAEYLNQCEELEIKVAQGAKPGEGGQLPGMK 977

Query: 950  VTAEIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVGT 1009
            VT  IA+LR+S  GVTLISPPPHHDIYSIEDLAQLI+DLKQINP+  V+VKLV+  GVGT
Sbjct: 978  VTDLIARLRHSTKGVTLISPPPHHDIYSIEDLAQLIYDLKQINPRCKVTVKLVASSGVGT 1037

Query: 1010 IATGVAKAYADLITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQ 1069
            IA GVAKA AD+I ISG++GGT ASP TS+KYAG PWE+GL E  Q L  N LR ++ L+
Sbjct: 1038 IAAGVAKAKADVILISGHNGGTGASPATSIKYAGLPWEMGLTEAHQVLAMNNLRERVTLR 1097

Query: 1070 VDGGLKTGLDVIKGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKDY 1129
             DGGL+TG D++  A+LGAE +G GTA ++AMGC  +R C  N C  GV TQDE LR   
Sbjct: 1098 TDGGLRTGRDIVMAAMLGAEEYGIGTAALIAMGCIMVRQCQSNTCPVGVCTQDEALR-GK 1156

Query: 1130 FKGLPEMVMNYFKGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDLL 1189
            F G  + V+N     A+EVR  LA +G   L ++IGR DLL  V   +A    LDL+ LL
Sbjct: 1157 FTGNADKVVNLITFYAQEVREILASIGARSLDEVIGRADLLAQVSRGSAHLDDLDLNPLL 1216

Query: 1190 EAPVSPQNLPLYCTEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGARL 1249
                   N+ +Y  + +       L+++IV DA   +++ + ++L Y V NTDR++G R 
Sbjct: 1217 ITVDGSANI-VYNRDKDRNAVPDTLDKEIVRDAARFLQDGEKMQLSYAVQNTDRTVGTRT 1275

Query: 1250 SGEIAKRYGNLGVATSP-IKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKI 1308
            S  I + +G      S  + V L G+AGQS G + A GL+L ++GDANDYVGKG++GG I
Sbjct: 1276 SSHIVRNFGMRNTLQSDHLTVKLQGSAGQSLGAFAAPGLKLEVSGDANDYVGKGLSGGTI 1335

Query: 1309 VIRPHQGTAFVCNEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNAC 1368
            V+RP   +    +E TI+GNT LYGAT G LFAAG+AGERFAVRNSG   V+EG G   C
Sbjct: 1336 VVRPPMASPLNASENTIVGNTVLYGATDGYLFAAGRAGERFAVRNSGASVVVEGCGACGC 1395

Query: 1369 EYMTGGIVAILGATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTDLYIHQEHL 1428
            EYMTGGI  ILG+ G NFGAGMTGG AY+ D  G  +  +N ES+   A+T  +  ++ L
Sbjct: 1396 EYMTGGIAVILGSIGANFGAGMTGGMAYIYDPEGKAETMMNMESLVTCAVTVAH-WEDQL 1454

Query: 1429 RGLIAEHLEETGSAHAERILANFDEWIPKFYLIKPQ 1464
            +GLI  HL+ETGS  A  IL +++     F  I P+
Sbjct: 1455 KGLIERHLQETGSRKAAEILQHWENEKGNFLQICPK 1490