Pairwise Alignments

Query, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1482 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score = 1993 bits (5162), Expect = 0.0
 Identities = 982/1472 (66%), Positives = 1178/1472 (80%), Gaps = 4/1472 (0%)

Query: 1    MALYDPSLEKDNCGFGLIAHMEGQASHKLVRTAISALDRMTHRGGIAADGKTGDGCGLLL 60
            M+LY PS E+DNCGFGLIA M+G+ASH++VRTAI  LDRM HRGGIAADG+TGDGCGLL+
Sbjct: 1    MSLYHPSFERDNCGFGLIAQMDGEASHRIVRTAIHGLDRMKHRGGIAADGRTGDGCGLLM 60

Query: 61   QKPDSYLRLIAEEQHWKLSKQYAIGMLFLSRDPHKAQLAQQIVNQELAKETLSVAGWRKV 120
            Q P  +   +A E  W LS+++A+GMLFLS+D  KA   ++ + +EL KETLSVAGWR+V
Sbjct: 61   QLPIKFFEAVASENDWHLSRKFAVGMLFLSQDEEKANYTKRTLERELEKETLSVAGWREV 120

Query: 121  PTNPKVLGPIALDSLPDIQQVFISAPAGWRERDVERRLYIARRRIEKQITDDRDFYICSL 180
            P NP+VLGPI   S P I QV I++P GWRE+D+ERRLY+ARRR+E+QITD  DFY+ SL
Sbjct: 121  PVNPEVLGPIGQASQPKIWQVLINSPIGWREKDLERRLYMARRRLEQQITDCEDFYVASL 180

Query: 181  STQVLVYKGLCMPADLPRFYLDLADLRMESAICLFHQRFSTNTQPRWPLAQPFRYLAHNG 240
            S QV+VYKGL MPADLP FY DLAD+R++SAICLFHQRFSTNT P+WPLAQPFRYLAHNG
Sbjct: 181  SGQVIVYKGLMMPADLPAFYPDLADIRLQSAICLFHQRFSTNTSPKWPLAQPFRYLAHNG 240

Query: 241  EINTIEGNRQWARARAYKFASPLLPDLQSAAPFVNETGSDSSSLDNMLDLFLAGGMDIFR 300
            EINTI GNRQWARARAYKF +PLLPDLQ AAPFVNE+GSDSSSLDNML++ LAGGMD++R
Sbjct: 241  EINTITGNRQWARARAYKFNAPLLPDLQQAAPFVNESGSDSSSLDNMLEMLLAGGMDLYR 300

Query: 301  AMRMLVPPAWQNHPDMDPDLRAFYDFNSKHMEPWDGPAGIVLSDGRYAACNLDRNGLRPA 360
            AMR+L+PPAWQ++P+MD +L+AFYDFNS HMEPWDGPAGIV+++GR+ AC +DRNGLRP+
Sbjct: 301  AMRLLIPPAWQSNPEMDDELKAFYDFNSMHMEPWDGPAGIVMTNGRHVACAVDRNGLRPS 360

Query: 361  RYVITKDKLITLASEVGIWDYAPDEVSEKGRVGPGELLVIDTRKGKIWQSSEIDNDLKSR 420
            RYVITKD+++TLASE+GIWDYAPDEV EKGRVGPGELLV+DT  G+++ S EIDNDLK R
Sbjct: 361  RYVITKDRILTLASEIGIWDYAPDEVVEKGRVGPGELLVLDTLNGQLYSSFEIDNDLKRR 420

Query: 421  HPYREWMENNVHKLTPFSQLPDDKVGERSFDADLLKTYQKQFAMSNEEIDQILRVLGDMA 480
            HPY+EWM  N   L P  Q+P +  G   F AD L  YQKQF  S EE++Q++ VL +  
Sbjct: 421  HPYKEWMAKNSQTLIPAEQMPSEAQGVCEFSADTLLQYQKQFGYSREELEQVIWVLAEKG 480

Query: 481  QEAVGSMGDDTPMAVLSSKERLISDYFRQKFAQVTNPPIDPLREKHVMSLATSIGQEMNV 540
            +EA GSMGDDTPMAVLS K R + DYFRQKFAQVTNPPIDPLREKHVMSLAT +G+E N+
Sbjct: 481  EEATGSMGDDTPMAVLSKKSRTLYDYFRQKFAQVTNPPIDPLREKHVMSLATCVGREQNL 540

Query: 541  FCETDGHAHRVTFDSPILLYSDMQQLLTLSDQHYRNTILDINFDPQEKNLKQAVLDLCDK 600
            F ET GHA+RV F SPILLYSD  QLL L   +YR   +D+N+D  E  L+ A+  +CD+
Sbjct: 541  FNETTGHAYRVMFSSPILLYSDFNQLLALDSTYYRANTVDLNYDLSE-GLEAAIRRVCDE 599

Query: 601  AEQVVREGTVLVVLSDRALTADRLPIPAAMAVGAVQARLVEANLRCDANIIIETGAARDP 660
            AE++ R GT L++LSDRA    +  IPAAMAVGAVQ  LV+ +LRCD NII+ET +ARDP
Sbjct: 600  AERLARTGTTLLILSDRATDKSKQVIPAAMAVGAVQRVLVDKSLRCDTNIIVETASARDP 659

Query: 661  HHFAVLIGFGATAVYPYLAYETLGKMIDDGALQKSYREVMQNYQYGINKGLYKIMSKMGI 720
            HHFAVL+GFGATA+YPYLAYE++  +     ++++ +++M N++ GI+KGL KIMSKMGI
Sbjct: 660  HHFAVLLGFGATAIYPYLAYESISALASRHGVRET-QQLMLNFRQGIDKGLRKIMSKMGI 718

Query: 721  STVASYRCSQLFEAVGLHRDVVDLCFKGVTTRIQGANFDDFEQDLFNLSRKAWAKRKPLE 780
            STVASYRCSQ FEA+GL  +VV+LCFKGV +RI+GA+F   E+D   L + A+   +PL 
Sbjct: 719  STVASYRCSQQFEAIGLSSEVVELCFKGVVSRIEGASFALLEKDQQTLQKLAFQAHQPLP 778

Query: 781  HGGLLKYVHGGEYHAYNPDVVGTLQKAVKSGEIMDYREFAQQVNQRPVAMLRDLLRLKTS 840
             GGLLKYV GGEYH +NPDVV TLQ++++  +   Y+ F + V+ RPVA LRDL  +K  
Sbjct: 779  QGGLLKYVEGGEYHCFNPDVVNTLQQSLRDQDYGVYKRFTELVDDRPVATLRDLFTVKGD 838

Query: 841  DKPLPLEHIEPASDLYKRFDSAAMSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRF 900
             + + L+ +E AS LY RFDSAAMSIGALSPEAHEALA AMNRLGG SNSGEGGEDPRRF
Sbjct: 839  KQAIELDKVEGASTLYPRFDSAAMSIGALSPEAHEALAVAMNRLGGRSNSGEGGEDPRRF 898

Query: 901  GTERNSRIKQVASGRFGVTPHYLTNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYS 960
             +ERNS IKQ+ASGRFGVT HYL NA+VLQIKVAQGAKPGEGGQLPG KV+ EIA LR +
Sbjct: 899  NSERNSAIKQIASGRFGVTAHYLVNAEVLQIKVAQGAKPGEGGQLPGDKVSVEIAALRNA 958

Query: 961  VPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALVSVKLVSEPGVGTIATGVAKAYAD 1020
             PGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKA++SVKLVSEPGVGTIATGVAKAYAD
Sbjct: 959  RPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKAMISVKLVSEPGVGTIATGVAKAYAD 1018

Query: 1021 LITISGYDGGTAASPLTSVKYAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDV 1080
            +ITISGYDGGT ASP+TSVKYAGSPWELGLAE  Q+LVANGLRHKIRLQVDGGLKTG DV
Sbjct: 1019 MITISGYDGGTGASPITSVKYAGSPWELGLAEVHQSLVANGLRHKIRLQVDGGLKTGTDV 1078

Query: 1081 IKGAILGAESFGFGTAPMVAMGCKFLRICHLNNCATGVATQDETLRKDYFKGLPEMVMNY 1140
            IK A+LGAESFGFGT PM+A+GCK+LRICHLNNCATGVATQ++ LR +++ GLPE VM Y
Sbjct: 1079 IKAALLGAESFGFGTVPMIALGCKYLRICHLNNCATGVATQNKQLRDNHYHGLPERVMTY 1138

Query: 1141 FKGLAEEVRGYLAELGVEKLTDLIGRTDLLEVVEGMTAKQSKLDLSDLLEAPVSPQNLPL 1200
            F+ +A E+R ++A LGV +   L+GR+D L  +EG T KQ +LDLS +L  P  P+   L
Sbjct: 1139 FEFMAREIREWMAALGVTEFEQLVGRSDWLAALEGATDKQQQLDLSAILYKPEVPEGCAL 1198

Query: 1201 YCTEPNTPFDKGALNQKIVEDALAAVENQQSLELYYNVINTDRSIGARLSGEIAKRYGNL 1260
               E N   DKG LNQKI+    AAV+  + L   + + NTDRS+GA LSG IA + G  
Sbjct: 1199 TWRETNPTDDKGELNQKILSHCQAAVDQGEPLTARFEINNTDRSVGAALSGYIATKVGRQ 1258

Query: 1261 GVATSPIKVVLNGTAGQSFGVWNAGGLELYLTGDANDYVGKGMAGGKIVIRPHQGTAFVC 1320
            G A +PI++  +G+AGQSFGVWNA GL L L GDANDYVGKGM+GGKI + P  G+ F  
Sbjct: 1259 G-AKAPIQLNFSGSAGQSFGVWNAPGLSLDLCGDANDYVGKGMSGGKITLYPPVGSMFQS 1317

Query: 1321 NEATIIGNTCLYGATGGKLFAAGKAGERFAVRNSGTIAVIEGAGDNACEYMTGGIVAILG 1380
             ++ I+GNTCLYGA+GGKLFAAG+AGERFAVRNSG IAV+EG GDN CEYMTGGIV +LG
Sbjct: 1318 EKSVILGNTCLYGASGGKLFAAGQAGERFAVRNSGAIAVVEGLGDNGCEYMTGGIVVVLG 1377

Query: 1381 ATGVNFGAGMTGGFAYVLDENGDFQGRVNDESVEAVALTDLYIHQEHLRGLIAEHLEETG 1440
             TGVNFGAGMTGGFAYV D  G F  R+N E V+   +T   I Q+HL+GLI EH+ ETG
Sbjct: 1378 KTGVNFGAGMTGGFAYVFDRFGHFNRRLNTEMVDMQKVT-APIQQQHLKGLIEEHVAETG 1436

Query: 1441 SAHAERILANFDEWIPKFYLIKPQAADLRTLL 1472
            S HA+ +L +F+ WI  F L+KP+   L  LL
Sbjct: 1437 SEHAKMLLNDFENWIDCFVLVKPKNVALDDLL 1468