Pairwise Alignments

Query, 489 a.a., glutamate synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., glutamate synthase, small subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  250 bits (639), Expect = 6e-71
 Identities = 163/476 (34%), Positives = 243/476 (51%), Gaps = 25/476 (5%)

Query: 7   FLEFGRELPKKIDPAERIKNNKEFV-LNQEFGK-KINQQASRCMDCGVPFCHNGCPIGNI 64
           F+E GR+ P K   A+R   + +F+ + Q F + ++++QA RC+DCG P+C   CP+ N 
Sbjct: 7   FIEVGRKDPTKHPAAKR---STQFIEIYQPFAQAQVSEQADRCLDCGNPYCEWKCPLHNY 63

Query: 65  IPEFNDAVYRDSWEEAWNILSSTNNFPEFTGRVCPAP--CETACVLGINQDPITICNIEK 122
           IP +     +    EA +++  TN  PE  GRVCP    CE AC L  +   +TI N+EK
Sbjct: 64  IPNWLKLAQQGRIMEAADLVHETNTLPEICGRVCPQDRLCEGACTLNADFGAVTIGNVEK 123

Query: 123 TIVERAYQEGYAKPKTPRSRTGKTVAIIGSGPAGLAAAEQLNAAGHSVTVFERDEKVGGL 182
            I + A  +G+    +  +   + VAI+G+GPAGL  A+ L   G    VF++  ++GGL
Sbjct: 124 YITDTAIAQGWRPDMSKVTPRKEKVAIVGAGPAGLGCADILARNGVKAVVFDKYPQIGGL 183

Query: 183 LRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDINAQQLRQEFDAVLLTGGSTVP 242
           L +GIP FKL   V+  +  ++E  G++F +   +G D+   QL +E+DAV L  G+   
Sbjct: 184 LTYGIPAFKLDKAVMATRRTVLEGMGIEFKLGVTVGKDVAFNQLLEEYDAVFLGMGTYTA 243

Query: 243 RDLSIPGRDLKGVYFAMQFLAQNNRRANGMDLKG-EEIHAKGKHVVVIGGGDTGSDCVGT 301
               + G D +GVY A+ +L  N     G        ++  GK VVV+GGGDT  DCV T
Sbjct: 244 MKAGLEGEDAQGVYQALPYLIGNTHHLMGSTSPDMPYLNLAGKRVVVLGGGDTAMDCVRT 303

Query: 302 SNRHGAASITQVEIMPIPPQKRPVNMPWPQYPMILRTSTSHEEGCERHWNILTKEFIGNE 361
           + R GA+S+          ++   NMP  +         + EEG    +N      I  +
Sbjct: 304 AVRQGASSVI------CAYRRDEANMPGSR----REVQNAREEGVNFLFN-RQPVAIKTQ 352

Query: 362 QGEVTGLRIADIVWKDAAPGERPSFDEVVGSERVIPCDMAFLAMGFLHPEPHGVLAQLGI 421
            G+V G+   +     A    R   + +VGSE+++  D   +A GF  P P    A  GI
Sbjct: 353 DGKVLGVECVETQMGKADASGRQRAEAIVGSEQLLEADAVIIAFGF-QPSPAPWFADYGI 411

Query: 422 KLDERGNV-----ATQDFATNQKGVFAAGDMRTGQSLVVRCINEGRECARAVDTFL 472
           +LD+ G V     A   F T    VFA GDM  G  LVV  I EGR+ A+ +  +L
Sbjct: 412 ELDQWGRVKASKQADNPFQTTNPKVFAGGDMVRGSDLVVTAIAEGRDAAQGILNYL 467