Pairwise Alignments

Query, 489 a.a., glutamate synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1428 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  170 bits (430), Expect = 3e-46
 Identities = 129/442 (29%), Positives = 204/442 (46%), Gaps = 48/442 (10%)

Query: 49  DCGVPFCHNGCPIGNIIPEFNDAVYRDSWEEAWNILSSTNNFPEFTGRVCPAPCETACVL 108
           DC  P C   CP G  +  +   + +    +A  ++  T   P   GRVCPA CET C  
Sbjct: 109 DCEAP-CQQACPAGVDVQRYLYHIAQGDHTQAVKVIKETLPLPLSIGRVCPAFCETECRR 167

Query: 109 GINQDPITICNIEK-----TIVERAYQEGYAKPKTPRSRTGKTVAIIGSGPAGLAAAEQL 163
           G+  DPI I  +++      + +  +   Y  P+   + TGK +AIIGSGPAGL+A   L
Sbjct: 168 GLIDDPIAIRQLKRHAADLDLADDEHGNSYQPPRL--ADTGKKIAIIGSGPAGLSAGYYL 225

Query: 164 NAAGHSVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVDINA 223
           +  GH++ +FE   K GG LR+GIP+++L   ++D++I L+ + G+       +G +I+ 
Sbjct: 226 SNQGHNIEIFEAMPKAGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTQMRLGHEIHL 285

Query: 224 QQLRQEFDAVLLTGGSTVPRDLSIPGRDLKGVYFAMQFLAQNNRRANGMDLKGEEIHAKG 283
            QL  +FDAV L  G+     +   G +L G Y  + FL  +        LK       G
Sbjct: 286 NQLITDFDAVCLAIGAQKAVPMHYKGSELAGCYLGVDFLKDH---CLDKQLK------LG 336

Query: 284 KHVVVIGGGDTGSDCVGTSNRHGAASITQVEIMPIPPQKRPVNMPWPQYPMILRTSTSHE 343
           K V VIGGG+T  DC  T+ R G   +T +       ++    MP   Y        +  
Sbjct: 337 KKVAVIGGGNTAIDCARTAVREG-CDVTLIY------RRTRAEMPAEAY----EVHEAEV 385

Query: 344 EGCERHWNILTKEFIGNEQGEVTGLRIADIVWKDA-APGER----------PSFDEVVGS 392
           EG + H+     E   +  G V  +  + +   +A A G R           +FD V+ +
Sbjct: 386 EGVKFHFLTNPLENHSDADGRVQSVTFSKMTLGEADASGRRAPVDTGETFTEAFDTVIAA 445

Query: 393 ERVIPCDMAFLAMGFLHPEPHGVLAQLGIKLDERGNV--ATQDFATNQKGVFAAGDMRTG 450
               P D++F+       +P G L+   + L     +    Q  ++  + +F  GD R G
Sbjct: 446 VSQAP-DLSFM------QDPKGQLSHGELALSRWNTLMGCEQTMSSGVEKLFVMGDARRG 498

Query: 451 QSLVVRCINEGRECARAVDTFL 472
            +  V  I +GR+ A+A+D  L
Sbjct: 499 PATAVAAIGDGRKAAKAIDKML 520