Pairwise Alignments

Query, 489 a.a., glutamate synthase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., rRNA metabolism protein from Klebsiella michiganensis M5al

 Score =  139 bits (351), Expect = 4e-37
 Identities = 129/434 (29%), Positives = 195/434 (44%), Gaps = 47/434 (10%)

Query: 48  MDCGVPFCHNGCPIGNIIPEFNDAVYRDSWEEAWNILSSTNNFPEFTGRVCPAPCETACV 107
           +DC V  C   C I   IPE+   +    + +A  ++   N  P  TG +C   C+  C 
Sbjct: 455 LDCYVAPCVTACAIKQDIPEYIRLLGEHRYADALELIYQRNALPAITGHICDHQCQYNCT 514

Query: 108 LGINQDPITICNIEKTIVER---AYQEGYAKPKTPRSRTGKTVAIIGSGPAGLAAAEQLN 164
                  + I  ++K  +E+   AY+  + KP    SR    VA+IG+GPAGLAA   L 
Sbjct: 515 RLDYDSALNIRELKKVALEKGWDAYRSRWHKPAGSGSR--HPVAVIGAGPAGLAAGYFLA 572

Query: 165 AAGHSVTVFERDEKVGGLLRFGIPDFKLGMDVIDRKINLMEQAGVKFVVNAHIGVD--IN 222
            AGH VTVFER+   GG+++  IP F++  ++I   I+ +   GVK       G D  ++
Sbjct: 573 RAGHPVTVFEREANAGGVVQNIIPQFRIPGELIQHDIDFVVAHGVKI----EYGCDPHLS 628

Query: 223 AQQLRQEFDAVLLTGGSTVPRDLSIPGRDLKGVYFAMQFLAQNNRRANGMDLKGEEIHAK 282
            ++L+ +    +L G  T        G D + V+ ++QFL Q NR        G E++  
Sbjct: 629 VEKLQAKGFRYVLVGTGTDKNSGVKLGGDNQNVHKSLQFLRQFNR--------GAELNL- 679

Query: 283 GKHVVVIGGGDTGSDCVGTSNRHGAASITQVEIMPIPPQKRPVNMP-W-PQYPMILRTST 340
           GKHV V+G G+T  DC        A  +  V+   I  ++    MP W  +Y   L    
Sbjct: 680 GKHVAVVGAGNTAMDCA-----RAALRVPGVQSATIVYRRSQQEMPAWREEYDEALLDGV 734

Query: 341 SHEEGCERHWNILTKEFIGNEQGEVTGLRIADIVWKDAAPGERP-SFDEVVGSERVIPCD 399
             E      W    ++F  N  G +  +R+  +   D     RP   DE+    R +  D
Sbjct: 735 GFE------WLCNPEQF--NADGTLV-VRVMKLGEPDEKGRRRPVETDEL----RTLKVD 781

Query: 400 MAFLAMGFLHPEPHGVLAQLGIKLDERG-NVATQDFATNQKGVFAAGDMRTGQSLVVRCI 458
               A+G    +    L+ +GI LD +G  V   D  T++  VF  GD++ G S +V  I
Sbjct: 782 SLITAIG--EQQDGEALSAMGIPLDPQGWPVVNADGETSKPNVFLIGDVQRGPSSIVSAI 839

Query: 459 NEGRECARAVDTFL 472
              R   RA D  L
Sbjct: 840 GNAR---RATDVIL 850



 Score = 25.8 bits (55), Expect = 0.008
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 10/71 (14%)

Query: 10  FGRELPKKIDPAERIKNNKEFVLN----QEFGKKINQQASRCMDCG------VPFCHNGC 59
           +G ++   +DPA+  +      +      +    + Q+ASRC++C       V  C N  
Sbjct: 859 YGNKVWNNVDPAKVYQRKGAIAVTLVDKNQREAFVEQEASRCLECNYVCSKCVDVCPNRA 918

Query: 60  PIGNIIPEFND 70
            I   +P F +
Sbjct: 919 NISVAVPGFQN 929