Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1536 a.a., glutamate synthase (ferredoxin) from Synechococcus elongatus PCC 7942

 Score = 1253 bits (3242), Expect = 0.0
 Identities = 689/1510 (45%), Positives = 954/1510 (63%), Gaps = 53/1510 (3%)

Query: 33   EHDACGIGFVAHLKNRKSHQVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQKPHEFLL 92
            E DACG+GFVA  + R SH +V ++L  L  MEHRGG   D  SGDGAG++   P + L 
Sbjct: 23   ERDACGVGFVADQQGRASHDLVEKSLRALGCMEHRGGCSADSDSGDGAGLMTAIPTDLL- 81

Query: 93   EEAVKLGIKLPS-FEKYGVGVVLFPKDEHKRAQCRDILERNAKRLDLDVIGYRVLPTNNS 151
                 LG   P+     G+G+V  P+   +    R ++E+     +L  +G+R++PT   
Sbjct: 82   --KTWLGAAAPADLSSVGLGMVFLPQHGAEATIARQLIEQIVAEENLQFLGWRLVPTRPE 139

Query: 152  MLGADPLSTEPQFEHVFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGDDFYINSM 211
            +LG    +  P+ E  FI+    ++ DE ER+LY++R        +++    +DFYI S+
Sbjct: 140  VLGQQARANLPRIEQCFIASEQ-LRDDEFERQLYLVRKRVETAVKKALGTASEDFYICSL 198

Query: 212  SYKTLVYKGQLTTEQVPQYFLDLQNPTMVTALALVHSRFSTNTFPKWRLAQPFRYIAHNG 271
            S +T+VYKG + +E + Q++ DL NP   +   + H RFSTNT PKW LAQP R++ HNG
Sbjct: 199  SSRTVVYKGMVRSEVLGQFYTDLTNPAYTSNFGVYHRRFSTNTMPKWPLAQPMRFLGHNG 258

Query: 272  EINTVRGNLNWMKAREAILQSKLFTQAEIDMLLPICQEGASDSANFDMVLELLVLSGRSL 331
            EINT+ GN+NWM AR+A LQ   +    I  LLP+     SDSAN D  LELLV SGR+ 
Sbjct: 259  EINTLLGNINWMMARQADLQHPAWGD-RIGDLLPVVDLNRSDSANLDNALELLVNSGRTP 317

Query: 332  PHALMMMIPEAWQENKAM--DPKRRAFYQYHANVMEPWDGPASVCFTDGVQVGATLDRNG 389
              ALM+M+PEA+Q   A+   P+   FY++++ + EPWDGPA + F+DG +VGA LDRNG
Sbjct: 318  QEALMVMVPEAYQNQPALADHPEIVDFYEFYSGLQEPWDGPALLVFSDGKKVGACLDRNG 377

Query: 390  LRPSRYTVTKDDFLIMASESGVVEIDPANVEYRGRLQPGRIFVADLEQGRIISDEEVKDG 449
            LRP+RY++T D +++ ASE+GVV++    +  +GRL PG++   DLE   +I + ++K  
Sbjct: 378  LRPARYSITADGYIVFASEAGVVDLPVETIIEKGRLGPGQMIEVDLETKEVIKNWDIKKR 437

Query: 450  IASAQPYEKWVEENLLSLKKLPDADNVHSQPSPERLLHRQQAFGVSSEEVNDIILTLAQT 509
            IAS QPY +W++E  +   K  D  N   Q     LL  Q  FG ++E+V+ +I  +A  
Sbjct: 438  IASQQPYGQWLQERQVLENK--DFGN-EQQLGDFDLLRLQTGFGYTAEDVDMVIEAMASD 494

Query: 510  GYEPLGSMGADWPVAVLSHQSQHLSNYFKQLFAQVTNPPIDPIRERMVMSLNTYIGRDQN 569
            G EP   MG D P+AVLS +++ L +YFKQ FAQVTNP IDP+RE +VMSL+  +G   N
Sbjct: 495  GKEPTFCMGDDIPLAVLSSKARLLYDYFKQRFAQVTNPAIDPLRESLVMSLSMTLGARDN 554

Query: 570  LLAETPAHCRKVELESPVISNAELEKIRAIDNEHLQAKTLDIVFRASDEPGKLERALKRI 629
            LL   P   R ++L+SPV++ AELE+++      L+A  L  ++     P  L+ A+  +
Sbjct: 555  LLQVGPESARLLKLDSPVLNEAELEQVK---QSTLKAAELSTLYAIEQGPDGLQAAIAAL 611

Query: 630  CQYAEDAVIDGYSIILLTDRA---VNSNHAAIPAMLAVGAVHHHLIRKGLRSKCGIVVET 686
            CQ AE AV  G+ I++L+DR    +    + IP +LAVGAVHHHLIR+GLR K  +VV+T
Sbjct: 612  CQQAEQAVQAGHQILILSDRTGAGLAPQISYIPPLLAVGAVHHHLIRQGLRMKASLVVDT 671

Query: 687  GDARETHHFATLLGYGANAVNPYLVVETIVDL----KRQKKLD----ADVSVEKYFENYR 738
                 THHFA L+GYGA+AV P+L +ET+       K Q  ++    A VS+    +N+R
Sbjct: 672  AQCWSTHHFACLIGYGASAVCPWLALETVRHWWHAPKTQSLMERGKIAQVSLAGAQQNFR 731

Query: 739  KGVNGGLLKIFSKMGISTLQSYHGAQIFEALGISKAVVDKYFTGTITRIQGLTLDDIAKE 798
            K V  GLLKI SKMGIS L SYHGAQIFEA+G+S  VVD  F GT +R+ GLTL DIA E
Sbjct: 732  KAVEAGLLKILSKMGISLLPSYHGAQIFEAIGLSMEVVDLAFRGTTSRLGGLTLADIAHE 791

Query: 799  VLVRHRIGYPTREIPLQVLDVGGVYQWKQRGEQHLFNPETIHLLQESTRH-KNYQQFKKY 857
            V+  H   +P  E+  + L+  G  Q++  GE H+ +PE    L ++    KNY  F+ Y
Sbjct: 792  VMSFHTRAFP--ELNQKKLENFGFVQYRPGGEYHMNSPEMSKALHKAVAAGKNYDHFEVY 849

Query: 858  AAAVDSQGDKAVTLRSQLDFVKNPAGSIPIEEVEPIESIVKRFATGAMSFGSISYEAHST 917
               ++ +      LR  L FV +   +I ++EVE +E+IV+RF TG MS G++S EAH T
Sbjct: 850  RKYLEER--PVTALRDLLQFVSDRP-AISLDEVESVEAIVQRFCTGGMSLGALSREAHET 906

Query: 918  LAIAMNRLGAKSNSGEGGEDPMRFELNA------------------NGDSERSAIKQVAS 959
            LAIAMNRLG KSNSGEGGEDP+R+++                    NGD+  SAIKQ+AS
Sbjct: 907  LAIAMNRLGGKSNSGEGGEDPVRYKVLGDVDAEGNSPTLPHLHGLRNGDTASSAIKQIAS 966

Query: 960  GRFGVTSYYLTNADEIQIKMAQGAKPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHH 1019
            GRFGVT  YL +AD+++IK++QGAKPGEGGQLPG KV  +I   R+S  GV LISPPPHH
Sbjct: 967  GRFGVTPEYLMSADQLEIKVSQGAKPGEGGQLPGKKVSPYIAFLRNSKAGVSLISPPPHH 1026

Query: 1020 DIYSIEDLAQLIFDLKNANRKGRVNVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGA 1079
            DIYSIEDLAQLIFDL   N K +V+VKLV+E G+GT+A+GVAKA AD++ ++GHDGGTGA
Sbjct: 1027 DIYSIEDLAQLIFDLHQINPKAQVSVKLVAEIGIGTVAAGVAKANADIIQVSGHDGGTGA 1086

Query: 1080 SPISSIRHTGLPWELGLAETHQTLLKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGV 1139
            SP+SSI+H G PWELGL E H+ L++N LR R++++ DG +KT  D+ +A L+GAEE+G 
Sbjct: 1087 SPLSSIKHAGGPWELGLTEVHRVLMENQLRQRVLLRVDGGLKTGWDVVMAALMGAEEFGF 1146

Query: 1140 ATAALVVEGCIMMRKCHKNTCPVGIATQNKTLRERFAGRVDDVVTFFQYMAQGLREIMAE 1199
             + A++ EGCIM R CH N CPVG+ATQ + LR+RF G  + VV FF  +A+ +R I+A+
Sbjct: 1147 GSIAMIAEGCIMARVCHTNNCPVGVATQQEQLRKRFTGIPEHVVNFFILIAEEVRSILAK 1206

Query: 1200 LGFRTINEMVGQAHKLKVRDDIGHWKYKNLDLSPILFIEQPRSEDGIYCQTQQNHQLESI 1259
            LG+R++ E+ G+   L  R D+   K   L+L  ++ +   RS D  +    + H    +
Sbjct: 1207 LGYRSLTELTGRTDLLAPRPDLKLTKTAALNLDCLIKLPDTRS-DRSWLVHDEVHDNGPV 1265

Query: 1260 LDRTLI--QLATPALERGEAVKAELPIINTDRSTGTMLSNEICKVYKDQGLPQPMQVKFN 1317
            LD  L+     T A+   ++V  E  I+NTDRS G  L+  I + Y + G    + + FN
Sbjct: 1266 LDDQLLANPALTAAIANQDSVAIEQAIVNTDRSVGARLAGAIAQRYGNYGFEGQISLNFN 1325

Query: 1318 GSAGQSFGAFLTKGVYFEVEGDANDYWGKGLSGGTLVLYPNRNATIVPEENIVVGNVCFY 1377
            GSAGQSFGAF   GV   + G+ANDY GKG++GG +++ P       P ++ +VGN C Y
Sbjct: 1326 GSAGQSFGAFNISGVSLNLVGEANDYVGKGMNGGEIIVRPEAGVRFDPSQSSIVGNTCLY 1385

Query: 1378 GATSGESYIRGLAGERFCVRNSGAKVVVEGIGDHGCEYMTGGVAVILGSTGRNFAAGMSG 1437
            GAT G  +  G AGERF VRNS A+ VVEG GDH CEYMTGG  V+LG  GRN  AGM+G
Sbjct: 1386 GATGGSLFANGRAGERFGVRNSKAQAVVEGTGDHCCEYMTGGTIVVLGPCGRNVGAGMTG 1445

Query: 1438 GVAYVWDKSGDFQSKLNAELVDLDPIE-AEDRALLKEMLTKHVQFTGSEVAKAFLANFDA 1496
            G+AY  D+ G F +K+N E+V L  +  +     LK+++T H + TGS  A   L  ++ 
Sbjct: 1446 GLAYFLDEDGQFPAKVNPEIVKLQRVSTSAGEQQLKQLITAHAEKTGSPKACHILEQWEQ 1505

Query: 1497 SLATMVKVMP 1506
             L    +V+P
Sbjct: 1506 YLPQFWQVVP 1515