Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1483 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score = 1230 bits (3182), Expect = 0.0
 Identities = 672/1508 (44%), Positives = 933/1508 (61%), Gaps = 33/1508 (2%)

Query: 27   LYTPELEHDACGIGFVAHLKNRKSHQVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQK 86
            LY P  E D CG G +A +    SH++V  A+  L RM+HRGG   D  +GDG G+L+Q 
Sbjct: 3    LYHPSFERDNCGFGLIAQMDGEASHRIVRTAITGLDRMKHRGGIAADGRTGDGCGLLMQL 62

Query: 87   PHEFLLEEAVKLGIKLPSFEKYGVGVVLFPKDEHKRAQCRDILERNAKRLDLDVIGYRVL 146
            P +F    A +    L    K+ VG+    +DE K A  R +LER  ++  L + G+R +
Sbjct: 63   PIKFFESIAAENDWHLS--RKFAVGMFFLSQDEEKVAAARFVLERELEKETLCIAGWREV 120

Query: 147  PTNNSMLGADPLSTEPQFEHVFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGDDF 206
            P N  +LG    ++ P+   V I+   G +  +LER+LY+ R       LE       DF
Sbjct: 121  PVNPDVLGEIGKASLPRIVQVLINAPIGWREKDLERRLYMARRR-----LEQQMTADPDF 175

Query: 207  YINSMSYKTLVYKGQLTTEQVPQYFLDLQNPTMVTALALVHSRFSTNTFPKWRLAQPFRY 266
            Y+ S+S + +VYKG +    +P ++ DL +  + +A+ L H RFSTNT PKW LAQPFRY
Sbjct: 176  YVASLSGQVIVYKGLMMPADLPAFYPDLADLRLESAICLFHQRFSTNTSPKWPLAQPFRY 235

Query: 267  IAHNGEINTVRGNLNWMKAREAILQSKLFTQAEIDMLLPICQEGASDSANFDMVLELLVL 326
            +AHNGEINT+ GN  W +AR     S L    ++    P   E  SDS++ D +LE+L+ 
Sbjct: 236  LAHNGEINTITGNRQWARARAYKFNSPLLP--DLQQAAPFVNETGSDSSSLDNMLEMLLS 293

Query: 327  SGRSLPHALMMMIPEAWQENKAMDPKRRAFYQYHANVMEPWDGPASVCFTDGVQVGATLD 386
             G  L  A+ ++IP AWQ N  MD + +AFY +++  MEPWDGPA +  T+G      +D
Sbjct: 294  GGMDLYRAMRLLIPPAWQSNPEMDEELKAFYDFNSMHMEPWDGPAGIVMTNGRHAACAVD 353

Query: 387  RNGLRPSRYTVTKDDFLIMASESGVVEIDPANVEYRGRLQPGRIFVADLEQGRIISDEEV 446
            RNGLRPSRY +TKD  L +ASE G+ +  P  V  +GR+ PG + V D   GR+    E+
Sbjct: 354  RNGLRPSRYVITKDRILTLASEVGIWDYQPDEVVEKGRVGPGELLVLDTLNGRLYQSFEI 413

Query: 447  KDGIASAQPYEKWVEENLLSLKKLPDADNVH---SQPSPERLLHRQQAFGVSSEEVNDII 503
             + +    PY++W+ +N  +LK   +  +     S+ S + LL  Q+ FG S EE+  +I
Sbjct: 414  DNDLKRRHPYKEWMAKNSRTLKSAEEMSSEQHGASEFSRDTLLQYQKLFGYSREELEQVI 473

Query: 504  LTLAQTGYEPLGSMGADWPVAVLSHQSQHLSNYFKQLFAQVTNPPIDPIRERMVMSLNTY 563
              LA  G E +GSMG D P+AVLS++ + L +YF+Q FAQVTNPPIDP+RE+ VMSL T 
Sbjct: 474  WVLASQGEEAVGSMGDDTPMAVLSNKQRSLYDYFRQKFAQVTNPPIDPLREKHVMSLATC 533

Query: 564  IGRDQNLLAETPAHCRKVELESPVISNAELEKIRAIDNEHLQAKTLDIVFRASDEPGKLE 623
            +GR+QNL  ET  H  +V   SPV+  ++  ++ ++D  + +A  +D+ +   D    LE
Sbjct: 534  VGREQNLFNETTGHAYRVMFNSPVLLFSDFNQLMSLDKAYYRANIVDLNY---DPAEGLE 590

Query: 624  RALKRICQYAEDAVIDGYSIILLTDRAVNSNHAAIPAMLAVGAVHHHLIRKGLRSKCGIV 683
             A++RI   AE     G ++++L+DRAV  N   IPA +AVGAV   L+ K LR    I+
Sbjct: 591  GAIRRITDDAERLARTGTTLLVLSDRAVAKNRQVIPAAMAVGAVQQMLVSKSLRCDTNII 650

Query: 684  VETGDARETHHFATLLGYGANAVNPYLVVETIVDLKRQKKLDADVSVEKYFENYRKGVNG 743
            VET  AR+ HHFA LLG+GA A+ PYLV E+I DL   K+ D+   +     N+R G+  
Sbjct: 651  VETASARDPHHFAVLLGFGATAIYPYLVYESIADLA--KRNDSADDMVALMLNFRYGIEK 708

Query: 744  GLLKIFSKMGISTLQSYHGAQIFEALGISKAVVDKYFTGTITRIQGLTLDDIAKEVLVRH 803
            GL KI SKMGIST+ SY  +Q FEA+G+++ V++  F G ++RI+G++ D +AK+    H
Sbjct: 709  GLRKIMSKMGISTVASYRCSQQFEAIGLARDVIELCFKGVVSRIEGVSFDHLAKDQHKLH 768

Query: 804  RIGYPTREIPLQVLDVGGVYQWKQRGEQHLFNPETIHLLQESTRHKNYQQFKKYAAAVDS 863
            +  +     P   L  GG+ ++ + GE H FNP+ ++ LQ S   ++Y ++K +A  VD 
Sbjct: 769  QAAFR----PHVSLQQGGLLKYVEGGEYHAFNPDVVNTLQASLISRDYSKYKAFAKHVD- 823

Query: 864  QGDKAVTLRSQLDFVKNPAGSIPIEEVEPIESIVKRFATGAMSFGSISYEAHSTLAIAMN 923
              ++ V +   L  VK    +IP + VE   ++  RF + AMS G++S EAH  LAIAMN
Sbjct: 824  --ERPVAMLRDLLGVKGTLDAIPADTVEAAANLYPRFDSAAMSIGALSPEAHEALAIAMN 881

Query: 924  RLGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRFGVTSYYLTNADEIQIKMAQGA 983
            RLG +SNSGEGGEDP RF     G  + SAIKQ+ASGRFGVT++YL NA+ +QIK+AQGA
Sbjct: 882  RLGGRSNSGEGGEDPRRF-----GTEKNSAIKQIASGRFGVTAHYLINAEVLQIKVAQGA 936

Query: 984  KPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANRKGRV 1043
            KPGEGGQLPG KV   I   R++ PGV LISPPPHHDIYSIEDLAQLIFDLK  N K  +
Sbjct: 937  KPGEGGQLPGHKVSVEIAGLRYARPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKALI 996

Query: 1044 NVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASPISSIRHTGLPWELGLAETHQTL 1103
            +VKLVSE G+GTIA+GVAKA AD++ ++G+DGGTGASP++S+++ G PWELGLAE HQ L
Sbjct: 997  SVKLVSEPGIGTIATGVAKAYADMITVSGYDGGTGASPLTSVKYAGSPWELGLAEVHQAL 1056

Query: 1104 LKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVATAALVVEGCIMMRKCHKNTCPVG 1163
            + NGLR++I +Q DG +KT  D+  A LLGAE +G  T  ++  GC  +R CH N C  G
Sbjct: 1057 VDNGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIALGCKYLRICHLNNCATG 1116

Query: 1164 IATQNKTLRER-FAGRVDDVVTFFQYMAQGLREIMAELGFRTINEMVGQAHKLKVRDDIG 1222
            +ATQ+K LR++ F G  + V+T+F+++A+ +RE MA LG     ++VG++  L       
Sbjct: 1117 VATQDKNLRDKHFHGLPERVMTYFEFVAEEVREWMARLGVAKFEDLVGRSDWLYALAGQT 1176

Query: 1223 HWKYKNLDLSPILFIEQPRSEDGIYCQTQQNHQLESILDRTLIQLATPALERGEAVKAEL 1282
              K   LDLSPIL+  Q R+      +          L++ L++ A  A+ RGE   A  
Sbjct: 1177 E-KQHGLDLSPILYQPQVRAGSSRTWKEINPPTDTGELNQRLLKDAADAISRGEGFSAAY 1235

Query: 1283 PIINTDRSTGTMLSNEICKVYKDQGLPQPMQVKFNGSAGQSFGAFLTKGVYFEVEGDAND 1342
             I NTDRS G  LS  I      +G   P+ + FNG+AGQSFG +   G+   + GDAND
Sbjct: 1236 SINNTDRSVGAALSGHIAACCGLKGTKAPVSLSFNGTAGQSFGVWNAPGLEMSLCGDAND 1295

Query: 1343 YWGKGLSGGTLVLYPNRNATIVPEENIVVGNVCFYGATSGESYIRGLAGERFCVRNSGAK 1402
            Y GKG+SGG L +YP   +    E   +VGN C YGAT G+ +  G AGERF VRNSGA 
Sbjct: 1296 YVGKGMSGGKLSIYPPLGSAFQSERTAIVGNTCLYGATGGQFFAAGQAGERFGVRNSGAV 1355

Query: 1403 VVVEGIGDHGCEYMTGGVAVILGSTGRNFAAGMSGGVAYVWDKSGDFQSKLNAELVDLDP 1462
             VVEG+GD+GCEYMTGG+ V+LG TG NF AGM+GG AYV+D+ G F  ++N E+VD   
Sbjct: 1356 AVVEGLGDNGCEYMTGGIVVVLGKTGVNFGAGMTGGFAYVFDQFGRFGRRVNTEMVDTQK 1415

Query: 1463 IE-AEDRALLKEMLTKHVQFTGSEVAKAFLANFDASLATMVKVMPRDYKAVLQKRKAQEQ 1521
            +E A  +  LK ++  HV+ TGSE A+A L++FD  L   V V P++  AV    K ++ 
Sbjct: 1416 VESAIHQKHLKGLIEAHVKETGSEHARAILSDFDNWLDCFVLVKPKNV-AVADLLKLEQP 1474

Query: 1522 QATLAAEA 1529
               LA +A
Sbjct: 1475 SPELAVKA 1482