Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1524 a.a., Glutamate synthase (ferredoxin) (NCBI) from Rhodospirillum rubrum S1H

 Score = 1229 bits (3179), Expect = 0.0
 Identities = 681/1487 (45%), Positives = 936/1487 (62%), Gaps = 23/1487 (1%)

Query: 28   YTPELEHDACGIGFVAHLKNRKSHQVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQKP 87
            Y P  EH +CG+G VA +  +    VV   +  L  + HRG    D  +GDGAGI ++ P
Sbjct: 36   YDPAHEHSSCGVGLVASINGKPRRSVVEAGIQALKVLFHRGAVDADGKTGDGAGIHVEIP 95

Query: 88   HEFLLEEAVKLGIKLPSFEKYGVGVVLFPK-DEHKRAQCRDILERNAKRLDLDVIGYRVL 146
             +F  +E ++     P   +  VG+V  PK D + +  CR I+E         + G+R +
Sbjct: 96   QDFF-KEHIRRTTHEPRAGRVAVGMVFLPKTDLNAQEVCRTIVESEILSFGYSIYGWRQV 154

Query: 147  PTNNSMLGADPLSTEPQFEHVFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGDDF 206
            P + S++G    +T P+ E + I+   G   ++ ER LYV+R    +  L   SN+G+  
Sbjct: 155  PVDTSVIGEKANATRPEIEQIMIANTRGGDDEQFERDLYVIRRRIEKHAL--ASNVGE-L 211

Query: 207  YINSMSYKTLVYKGQLTTEQVPQYFLDLQNPTMVTALALVHSRFSTNTFPKWRLAQPFRY 266
            YI S+S ++++YKG    EQ+  ++ DL +   +++ A+ H R+STNTFP WRLAQPFR 
Sbjct: 212  YICSLSCRSIIYKGMFLAEQLTSFYPDLLDERFISSFAIYHQRYSTNTFPTWRLAQPFRM 271

Query: 267  IAHNGEINTVRGNLNWMKAREAILQSKLFTQAEIDMLLPICQEGASDSANFDMVLELLVL 326
            +AHNGEINT+ GN+NWMKA E  + S  F +  I+ L P+ Q G SDSA  D V ELL  
Sbjct: 272  LAHNGEINTLTGNINWMKAHETRMDSPFFAEV-IEDLKPVVQPGGSDSAALDGVFELLCR 330

Query: 327  SGRSLPHALMMMIPEAWQENKAMDPKRRAFYQYHANVMEPWDGPASVCFTDGVQVGATLD 386
            +GR  P    M+IPE+  +N  M    +A   Y   VMEPWDGPA++  TDG  V A LD
Sbjct: 331  AGRPAPMVKAMVIPESLTQNALMPDHHKALIGYCNCVMEPWDGPAAIAATDGRWVVAGLD 390

Query: 387  RNGLRPSRYTVTKDDFLIMASESGVVEIDPANVEYRGRLQPGRIFVADLEQGRIISDEEV 446
            RNGLRP R+T+T D  LI+ SE+G+V +  +++  +GRL PG +   DL +GR+  D E+
Sbjct: 391  RNGLRPMRFTITTDGLLIVGSETGMVRVPESDILRKGRLGPGGMVAVDLREGRLYEDGEI 450

Query: 447  KDGIASAQPYEKWVEENLLSLKKLPDADNVHSQP-SPERLLHRQQAFGVSSEEVNDIILT 505
            KD +A+ +PY +WV + +  L+     D V     S E L  RQ A G S E++  I+  
Sbjct: 451  KDVLAAREPYAEWVGK-ITELEGQIGTDVVEPATLSTEDLCRRQLACGQSMEDLELILHP 509

Query: 506  LAQTGYEPLGSMGADWPVAVLSHQSQHLSNYFKQLFAQVTNPPIDPIRERMVMSLNTYIG 565
            +     E LGSMG D P+AVLS   + L ++F+Q F+QVTNPPID +RE  VMSL T +G
Sbjct: 510  MVADAKEALGSMGDDAPLAVLSSHYRALHHFFRQNFSQVTNPPIDALRETRVMSLKTRLG 569

Query: 566  RDQNLLAETPAHCRKVELESPVISNAELEKIRAIDNEHLQAKTLDIVFRASDEPGKLERA 625
               N+L E  + C  ++LESPV++ AE E +R    E +    +D  F     P  L  A
Sbjct: 570  NLGNILDEDASQCDLLQLESPVLTTAEFEAMRRSMGETVAE--VDCTFSPDGGPTGLRDA 627

Query: 626  LKRICQYAEDAVIDGYSIILLTDRAVNSNHAAIPAMLAVGAVHHHLIRKGLRSKCGIVVE 685
            + R+ Q AE+AV  G + ++LTD A+++   AIP +LA GAVH HLIR+ LR+   + V 
Sbjct: 628  IVRVQQEAEEAVRGGCTHVVLTDTALSATRVAIPMILAAGAVHTHLIREQLRTFTSLNVR 687

Query: 686  TGDARETHHFATLLGYGANAVNPYLVVETIVDLKRQKKLDADVSVEKYFENYRKGVNGGL 745
              +  + H+FA L+G GA  VNP+L  E+I D  R+   D  V++E   + ++K VN GL
Sbjct: 688  CAEVLDVHYFAVLIGVGATTVNPWLAQESIADRLRRGLFDEGVTLEAAMKRFKKAVNEGL 747

Query: 746  LKIFSKMGISTLQSYHGAQIFEALGISKAVVDKYFTGTITRIQGLTLDDIAKEVLVRHRI 805
            LKI SKMGIS + SY G   FEA+G+S+++V +YF    +RI G+ L  I K+VL +H  
Sbjct: 748  LKIMSKMGISVISSYRGGCNFEAIGLSRSLVAEYFPSLTSRISGIGLAGIQKKVLEQHAK 807

Query: 806  GYPTREIPLQVLDVGGVYQW-KQRGEQHLFNPETIHLLQESTRHKNYQQFKKYAAAVDSQ 864
             +    +   VL VGG Y+  KQ GE H F+ + IH LQ++    +YQ FKKY A +   
Sbjct: 808  AFGAAAV---VLPVGGFYRVRKQGGEAHHFDGDLIHTLQQAVATDSYQTFKKYTAGLRKL 864

Query: 865  GDKAVTLRSQLDFVKNPAGSIPIEEVEPIESIVKRFATGAMSFGSISYEAHSTLAIAMNR 924
                +T+R  LDF     G + IEEVE I SI +RF T AMS G++S EAH TL IAMNR
Sbjct: 865  --PPITIRDLLDFKPGTTG-VSIEEVESITSIRRRFVTPAMSLGALSPEAHGTLNIAMNR 921

Query: 925  LGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRFGVTSYYLTNADEIQIKMAQGAK 984
            +GAKS+SGEGGE   R++  ANGD+  SAIKQVASGRFGVT+ YL    EI+IK+AQGAK
Sbjct: 922  IGAKSDSGEGGEVRERYKPAANGDNANSAIKQVASGRFGVTAEYLNQCREIEIKVAQGAK 981

Query: 985  PGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANRKGRVN 1044
            PGEGGQLPG KV E I   RHSTPGV LISPPPHHDIYSIEDLAQLI+DLK  N + +V 
Sbjct: 982  PGEGGQLPGFKVTEMIAKLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPRAKVC 1041

Query: 1045 VKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASPISSIRHTGLPWELGLAETHQTLL 1104
            VKLVS +G+GTIA+GVAKA ADV+LI+GH GGTGASP +SI+H GLPWE+GLAE HQ L 
Sbjct: 1042 VKLVSRSGIGTIAAGVAKANADVILISGHSGGTGASPQTSIKHAGLPWEIGLAEVHQVLT 1101

Query: 1105 KNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVATAALVVEGCIMMRKCHKNTCPVGI 1164
             N LR+R+ ++ DG +K  RD+ IA +LGAEE+G+ T +LV  GCIM+R+CH NTCPVG+
Sbjct: 1102 LNRLRHRVTLRTDGGIKCGRDVVIAAMLGAEEYGIGTTSLVAMGCIMVRQCHSNTCPVGV 1161

Query: 1165 ATQNKTLRERFAGRVDDVVTFFQYMAQGLREIMAELGFRTINEMVGQAHKLKVRDDIGHW 1224
             TQ+  LR +F G  + VV  F +MA+ ++EI+A LG R+++E+VG+   L+ +   G  
Sbjct: 1162 CTQDDDLRAKFTGTAEKVVNLFSFMAEEVKEILASLGMRSLDEVVGRTDLLQ-QVSRGAD 1220

Query: 1225 KYKNLDLSPILFIEQPRSEDG-IYCQTQQNHQLESILDRTLIQLATPALERGEAVKAELP 1283
               +LDL+PIL   QP +  G   C  +  +++   LD  +I  A  AL+ GE ++    
Sbjct: 1221 HLDDLDLNPILV--QPDTGSGPNICTMEGRNEVPETLDAQMIADAKSALDDGEKMQLTYT 1278

Query: 1284 IINTDRSTGTMLSNEICKVYKDQGL-PQPMQVKFNGSAGQSFGAFLTKGVYFEVEGDAND 1342
            + NT R+ GT LS+ I   Y   GL P  + V+  GS GQS GAF  +G+  EV GD+ND
Sbjct: 1279 VRNTHRAIGTKLSHRIVIKYGMTGLEPGHITVRLRGSCGQSLGAFAVQGLKLEVFGDSND 1338

Query: 1343 YWGKGLSGGTLVLYPNRNATIVPEENIVVGNVCFYGATSGESYIRGLAGERFCVRNSGAK 1402
            Y GKGLSGGT+V+ P  ++ +   EN ++GN   YGATSG+ +  G AGERF VRNSGA+
Sbjct: 1339 YVGKGLSGGTIVVRPAVSSPLQTNENTIIGNTVLYGATSGKLFAAGQAGERFAVRNSGAQ 1398

Query: 1403 VVVEGIGDHGCEYMTGGVAVILGSTGRNFAAGMSGGVAYVWDKSGDFQSKLNAELVDLDP 1462
            VVVEG G +GCEYMT G  VILG  G NF AGM+GG+A+V+D    F  ++N + V    
Sbjct: 1399 VVVEGCGSNGCEYMTNGTVVILGQVGANFGAGMTGGMAFVYDPQNTFPLRVNPDSVIWQR 1458

Query: 1463 IEAEDRA-LLKEMLTKHVQFTGSEVAKAFLANFDASLATMVKVMPRD 1508
            IE    A +L++++ +HV  T S+ A+  LA++   +    +++P++
Sbjct: 1459 IEVPHYAGVLRDLIAEHVSETQSKYAEHLLADWGREIGNFWQIVPKE 1505