Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 1482 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score = 1227 bits (3175), Expect = 0.0
 Identities = 659/1489 (44%), Positives = 936/1489 (62%), Gaps = 37/1489 (2%)

Query: 27   LYTPELEHDACGIGFVAHLKNRKSHQVVTQALDMLARMEHRGGQGCDPCSGDGAGILLQK 86
            LY P  E D CG G +A +    SH++V  A+  L RM+HRGG   D  +GDG G+L+Q 
Sbjct: 3    LYHPSFERDNCGFGLIAQMDGEASHRIVRTAIHGLDRMKHRGGIAADGRTGDGCGLLMQL 62

Query: 87   PHEFLLEEAVKLGIKLPSFEKYGVGVVLFPKDEHKRAQCRDILERNAKRLDLDVIGYRVL 146
            P +F   EAV          K+ VG++   +DE K    +  LER  ++  L V G+R +
Sbjct: 63   PIKFF--EAVASENDWHLSRKFAVGMLFLSQDEEKANYTKRTLERELEKETLSVAGWREV 120

Query: 147  PTNNSMLGADPLSTEPQFEHVFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGDDF 206
            P N  +LG    +++P+   V I+   G +  +LER+LY+ R       LE      +DF
Sbjct: 121  PVNPEVLGPIGQASQPKIWQVLINSPIGWREKDLERRLYMARRR-----LEQQITDCEDF 175

Query: 207  YINSMSYKTLVYKGQLTTEQVPQYFLDLQNPTMVTALALVHSRFSTNTFPKWRLAQPFRY 266
            Y+ S+S + +VYKG +    +P ++ DL +  + +A+ L H RFSTNT PKW LAQPFRY
Sbjct: 176  YVASLSGQVIVYKGLMMPADLPAFYPDLADIRLQSAICLFHQRFSTNTSPKWPLAQPFRY 235

Query: 267  IAHNGEINTVRGNLNWMKAREAILQSKLFTQAEIDMLLPICQEGASDSANFDMVLELLVL 326
            +AHNGEINT+ GN  W +AR     + L    ++    P   E  SDS++ D +LE+L+ 
Sbjct: 236  LAHNGEINTITGNRQWARARAYKFNAPLLP--DLQQAAPFVNESGSDSSSLDNMLEMLLA 293

Query: 327  SGRSLPHALMMMIPEAWQENKAMDPKRRAFYQYHANVMEPWDGPASVCFTDGVQVGATLD 386
             G  L  A+ ++IP AWQ N  MD + +AFY +++  MEPWDGPA +  T+G  V   +D
Sbjct: 294  GGMDLYRAMRLLIPPAWQSNPEMDDELKAFYDFNSMHMEPWDGPAGIVMTNGRHVACAVD 353

Query: 387  RNGLRPSRYTVTKDDFLIMASESGVVEIDPANVEYRGRLQPGRIFVADLEQGRIISDEEV 446
            RNGLRPSRY +TKD  L +ASE G+ +  P  V  +GR+ PG + V D   G++ S  E+
Sbjct: 354  RNGLRPSRYVITKDRILTLASEIGIWDYAPDEVVEKGRVGPGELLVLDTLNGQLYSSFEI 413

Query: 447  KDGIASAQPYEKWVEEN---LLSLKKLPDADNVHSQPSPERLLHRQQAFGVSSEEVNDII 503
             + +    PY++W+ +N   L+  +++P       + S + LL  Q+ FG S EE+  +I
Sbjct: 414  DNDLKRRHPYKEWMAKNSQTLIPAEQMPSEAQGVCEFSADTLLQYQKQFGYSREELEQVI 473

Query: 504  LTLAQTGYEPLGSMGADWPVAVLSHQSQHLSNYFKQLFAQVTNPPIDPIRERMVMSLNTY 563
              LA+ G E  GSMG D P+AVLS +S+ L +YF+Q FAQVTNPPIDP+RE+ VMSL T 
Sbjct: 474  WVLAEKGEEATGSMGDDTPMAVLSKKSRTLYDYFRQKFAQVTNPPIDPLREKHVMSLATC 533

Query: 564  IGRDQNLLAETPAHCRKVELESPVISNAELEKIRAIDNEHLQAKTLDIVFRASDEPGKLE 623
            +GR+QNL  ET  H  +V   SP++  ++  ++ A+D+ + +A T+D+ +  S+    LE
Sbjct: 534  VGREQNLFNETTGHAYRVMFSSPILLYSDFNQLLALDSTYYRANTVDLNYDLSEG---LE 590

Query: 624  RALKRICQYAEDAVIDGYSIILLTDRAVNSNHAAIPAMLAVGAVHHHLIRKGLRSKCGIV 683
             A++R+C  AE     G ++++L+DRA + +   IPA +AVGAV   L+ K LR    I+
Sbjct: 591  AAIRRVCDEAERLARTGTTLLILSDRATDKSKQVIPAAMAVGAVQRVLVDKSLRCDTNII 650

Query: 684  VETGDARETHHFATLLGYGANAVNPYLVVETIVDLKRQKKLDADVSVEKYFENYRKGVNG 743
            VET  AR+ HHFA LLG+GA A+ PYL  E+I  L  +  +      ++   N+R+G++ 
Sbjct: 651  VETASARDPHHFAVLLGFGATAIYPYLAYESISALASRHGVR---ETQQLMLNFRQGIDK 707

Query: 744  GLLKIFSKMGISTLQSYHGAQIFEALGISKAVVDKYFTGTITRIQGLTLDDIAKEVLVRH 803
            GL KI SKMGIST+ SY  +Q FEA+G+S  VV+  F G ++RI+G +   + K+     
Sbjct: 708  GLRKIMSKMGISTVASYRCSQQFEAIGLSSEVVELCFKGVVSRIEGASFALLEKDQQTLQ 767

Query: 804  RIGYPTREIPLQVLDVGGVYQWKQRGEQHLFNPETIHLLQESTRHKNYQQFKKYAAAVDS 863
            ++ +       Q L  GG+ ++ + GE H FNP+ ++ LQ+S R ++Y  +K++   VD 
Sbjct: 768  KLAFQAH----QPLPQGGLLKYVEGGEYHCFNPDVVNTLQQSLRDQDYGVYKRFTELVD- 822

Query: 864  QGDKAVTLRSQLDFVKNPAGSIPIEEVEPIESIVKRFATGAMSFGSISYEAHSTLAIAMN 923
              D+ V     L  VK    +I +++VE   ++  RF + AMS G++S EAH  LA+AMN
Sbjct: 823  --DRPVATLRDLFTVKGDKQAIELDKVEGASTLYPRFDSAAMSIGALSPEAHEALAVAMN 880

Query: 924  RLGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRFGVTSYYLTNADEIQIKMAQGA 983
            RLG +SNSGEGGEDP RF    N     SAIKQ+ASGRFGVT++YL NA+ +QIK+AQGA
Sbjct: 881  RLGGRSNSGEGGEDPRRFNSERN-----SAIKQIASGRFGVTAHYLVNAEVLQIKVAQGA 935

Query: 984  KPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANRKGRV 1043
            KPGEGGQLPGDKV   I A R++ PGV LISPPPHHDIYSIEDLAQLIFDLK  N K  +
Sbjct: 936  KPGEGGQLPGDKVSVEIAALRNARPGVTLISPPPHHDIYSIEDLAQLIFDLKQINPKAMI 995

Query: 1044 NVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASPISSIRHTGLPWELGLAETHQTL 1103
            +VKLVSE GVGTIA+GVAKA AD++ I+G+DGGTGASPI+S+++ G PWELGLAE HQ+L
Sbjct: 996  SVKLVSEPGVGTIATGVAKAYADMITISGYDGGTGASPITSVKYAGSPWELGLAEVHQSL 1055

Query: 1104 LKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVATAALVVEGCIMMRKCHKNTCPVG 1163
            + NGLR++I +Q DG +KT  D+  A LLGAE +G  T  ++  GC  +R CH N C  G
Sbjct: 1056 VANGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIALGCKYLRICHLNNCATG 1115

Query: 1164 IATQNKTLRE-RFAGRVDDVVTFFQYMAQGLREIMAELGFRTINEMVGQAHKLKVRDDIG 1222
            +ATQNK LR+  + G  + V+T+F++MA+ +RE MA LG     ++VG++  L   +   
Sbjct: 1116 VATQNKQLRDNHYHGLPERVMTYFEFMAREIREWMAALGVTEFEQLVGRSDWLAALEGAT 1175

Query: 1223 HWKYKNLDLSPILFIEQPRSEDGIYCQTQQNHQLE--SILDRTLIQLATPALERGEAVKA 1280
              K + LDLS IL+  +P   +G     ++ +  +    L++ ++     A+++GE + A
Sbjct: 1176 D-KQQQLDLSAILY--KPEVPEGCALTWRETNPTDDKGELNQKILSHCQAAVDQGEPLTA 1232

Query: 1281 ELPIINTDRSTGTMLSNEICKVYKDQGLPQPMQVKFNGSAGQSFGAFLTKGVYFEVEGDA 1340
               I NTDRS G  LS  I      QG   P+Q+ F+GSAGQSFG +   G+  ++ GDA
Sbjct: 1233 RFEINNTDRSVGAALSGYIATKVGRQGAKAPIQLNFSGSAGQSFGVWNAPGLSLDLCGDA 1292

Query: 1341 NDYWGKGLSGGTLVLYPNRNATIVPEENIVVGNVCFYGATSGESYIRGLAGERFCVRNSG 1400
            NDY GKG+SGG + LYP   +    E+++++GN C YGA+ G+ +  G AGERF VRNSG
Sbjct: 1293 NDYVGKGMSGGKITLYPPVGSMFQSEKSVILGNTCLYGASGGKLFAAGQAGERFAVRNSG 1352

Query: 1401 AKVVVEGIGDHGCEYMTGGVAVILGSTGRNFAAGMSGGVAYVWDKSGDFQSKLNAELVDL 1460
            A  VVEG+GD+GCEYMTGG+ V+LG TG NF AGM+GG AYV+D+ G F  +LN E+VD+
Sbjct: 1353 AIAVVEGLGDNGCEYMTGGIVVVLGKTGVNFGAGMTGGFAYVFDRFGHFNRRLNTEMVDM 1412

Query: 1461 DPIEAE-DRALLKEMLTKHVQFTGSEVAKAFLANFDASLATMVKVMPRD 1508
              + A   +  LK ++ +HV  TGSE AK  L +F+  +   V V P++
Sbjct: 1413 QKVTAPIQQQHLKGLIEEHVAETGSEHAKMLLNDFENWIDCFVLVKPKN 1461