Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., rubredoxin from Methanococcus maripaludis S2

 Score =  120 bits (301), Expect = 3e-31
 Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 8/270 (2%)

Query: 905  MSFGSISYEAHSTLAIAMNRLGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRFGV 964
            MS+G++S      L+     +     SGEGG     FE      +    I +    ++ +
Sbjct: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFE------NAYKYILEYVPNQYSI 229

Query: 965  TSYYLTNADEIQIKMAQGAKPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIYSI 1024
            T   L   D ++IK+ Q +KPG GG LP +KV E I   R    G  ++SP   HDI + 
Sbjct: 230  TDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNK 289

Query: 1025 EDLAQLIFDLKNANRKGRVNVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASPISS 1084
            +DL   + +L+  +    + +K ++   +         AK D + I G  G T ASP   
Sbjct: 290  DDLKNKVSNLREKSGGKPIGIK-IAAGDIEADLEVATYAKPDFITIDGRPGATAASPKFI 348

Query: 1085 IRHTGLPWELGLAETHQTLLKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVATAAL 1144
               T +P    L    +   KNG+ + I +   G ++   D A A+ +GA+   + TAAL
Sbjct: 349  KDSTSVPTIFALYRAREFFNKNGITD-ISLVITGGLRISSDFAKAIAIGADAIAIGTAAL 407

Query: 1145 VVEGCIMMRKCHKNTCPVGIATQNKTLRER 1174
            +   C   R C    CPVG+ TQ   L++R
Sbjct: 408  MATACQQYRICDTGECPVGVTTQKPELKDR 437