Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., glutamate synthase-related protein from Methanococcus maripaludis JJ

 Score =  207 bits (528), Expect = 2e-57
 Identities = 127/319 (39%), Positives = 176/319 (55%), Gaps = 13/319 (4%)

Query: 903  GAMSFGSISYEAHSTLAIAMNRLGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRF 962
            G MS+G++S  +H  +A A+   G    +GEGG   +  +L    D+    I QVASGRF
Sbjct: 181  GHMSYGALSLNSHKAMAKAVKECGTFMGTGEGG---LHRDLYGYSDN---IITQVASGRF 234

Query: 963  GVTSYYLTNADEIQIKMAQGAKPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIY 1022
            GV S YL     I+IK+ QGAKPG GG LPG+KV   +  TR    G   ISP PHHDIY
Sbjct: 235  GVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIY 294

Query: 1023 SIEDLAQLIFDLKNANR-KGRVNVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASP 1081
            SIEDLAQLI  LK A R K  V VK+ +   V  IA+G+A + AD V+I G  GGTGA+P
Sbjct: 295  SIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAP 354

Query: 1082 ISSIRHTGLPWELGLAETHQTLLKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVAT 1141
                 + G+P E+ +A     L + G R++I + A G ++   D+  ++ LGA+   + T
Sbjct: 355  KVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGT 414

Query: 1142 AALVVEGCIMMRKCHKNTCPVGIATQNKTLRERFAGRVDD----VVTFFQYMAQGLREIM 1197
            AA+V  GC +  +C+   C  GIATQ   L +R    VDD    V          ++E++
Sbjct: 415  AAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRL--EVDDAARRVANLIHAWTHEIQELL 472

Query: 1198 AELGFRTINEMVGQAHKLK 1216
               G  +I  + G   +L+
Sbjct: 473  GAAGINSIESLRGNRDRLR 491



 Score = 36.2 bits (82), Expect = 9e-06
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 19/78 (24%)

Query: 494 VSSEEVNDIILTLAQTGYEPLGSMG--ADWPVAVLSHQSQHLSNYFKQLF---AQVTNPP 548
           V + EV   ++T A++G   L  MG   ++P+            YF ++     QVTNP 
Sbjct: 77  VWTPEVKQDVVTQAKSGCILLSGMGNAKEYPI------------YFDKIVLDACQVTNPS 124

Query: 549 IDPIRERMVMSLNTYIGR 566
           IDP+RE   M L TY+G+
Sbjct: 125 IDPLRE--PMELRTYVGK 140