Pairwise Alignments

Query, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., glutamate synthase, iron-sulfur cluster-binding subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  228 bits (581), Expect = 1e-63
 Identities = 138/349 (39%), Positives = 191/349 (54%), Gaps = 15/349 (4%)

Query: 874  QLDFVKNPAGSIPIEEVEPIESIVKRFATGAMSFGSISYEAHSTLAIAMNRLGAKSNSGE 933
            +L F + P G     E+ P   +       AMSFG+I+Y  H  +A A   LG   N+GE
Sbjct: 149  RLVFEETPQGPKLQTEIGPQLQLEYPIMFAAMSFGAINYNLHEAMAKAATELGTFYNTGE 208

Query: 934  GGEDPMRFELNANGDSERSAIKQVASGRFGVTSYYLTNADEIQIKMAQGAKPGEGGQLPG 993
            GG  P  +   AN       I QVASGRFGV   YL     ++IK+ QGAKPG GG LPG
Sbjct: 209  GGLHPDLYPYGAN------TIVQVASGRFGVHKDYLNAGSAVEIKVGQGAKPGIGGHLPG 262

Query: 994  DKVDEWIGATRHSTPGVGLISPPPHHDIYSIEDLAQLIFDLKNANR-KGRVNVKLVSEAG 1052
            +K+DE +  TR    G   ISP PHHDIYSIEDL QLI  +K A + +  V+VK+ +   
Sbjct: 263  EKIDEEVSRTRMVPKGSDAISPAPHHDIYSIEDLLQLICAIKEATQYRVPVSVKIAAVHN 322

Query: 1053 VGTIASGVAKAKADVVLIAGHDGGTGASPISSIRHTGLPWELGLAETHQTLLKNGLRNRI 1112
               IASG+ +A AD+V+I G  GGTGA+P     + G+P EL LA     L   G+RNR 
Sbjct: 323  APAIASGIVRAGADIVVIDGFRGGTGAAPTMIRDNVGIPIELALAAVDDRLRDEGIRNRA 382

Query: 1113 VVQADGQMKTPRDIAIAVLLGAEEWGVATAALVVEGCIMMRKCHKNTCPVGIATQNKTLR 1172
             + A G ++   D+  A+ LGA+   + TAAL+  GC +  +C+   CP GIAT    L+
Sbjct: 383  SIVAAGGVRCSADVVKAIALGADAVYIGTAALIAVGCTLCGRCYTGKCPWGIATNESRLK 442

Query: 1173 ER-----FAGRVDDVVTFFQYMAQGLREIMAELGFRTINEMVGQAHKLK 1216
            +R      A R+ ++V  + +  Q   E++  +G  +I  + G   KL+
Sbjct: 443  KRQNPDEAARRLTNLVRAWGHEIQ---EMLGGMGLNSIESLRGNRDKLR 488



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 4/36 (11%)

Query: 542 AQVTNPPIDPIRERMVMSLNTYIG--RDQNLLAETP 575
           +QVTNP IDP+RE   M L T++G   D+ +  ETP
Sbjct: 123 SQVTNPSIDPLRE--PMELRTFLGGRPDRLVFEETP 156



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)

Query: 633 AEDAVIDGYSIILLTDRAVNSNHAAIPAMLAVGAVHHHLIRKGLRSKCGIVVETGDARET 692
           A+  VIDG+         +  ++  IP  LA+ AV   L  +G+R++  IV   G  R +
Sbjct: 335 ADIVVIDGFRGGTGAAPTMIRDNVGIPIELALAAVDDRLRDEGIRNRASIVA-AGGVRCS 393

Query: 693 HHFATLLGYGANAV 706
                 +  GA+AV
Sbjct: 394 ADVVKAIALGADAV 407