Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  347 bits (890), Expect = e-100
 Identities = 177/312 (56%), Positives = 219/312 (70%), Gaps = 5/312 (1%)

Query: 1   MSEPMH----LHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVAS 56
           MS+P+     L  LVNT G D + R+G++V KLTL   F+CPNRDG++G GGCTFC+V S
Sbjct: 1   MSQPVSVTPTLDALVNTFGNDCRLRFGKRVRKLTLDAHFTCPNRDGSLGIGGCTFCHVPS 60

Query: 57  FADENTQQQSIQAQLKDRAGEIKRAKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVG 116
           F  ++ QQ  I +QLK +      A  Y  YFQAYTSTY EV VLK  Y++AL   ++ G
Sbjct: 61  FNADDGQQFDIPSQLKRQMAGRTDAL-YFIYFQAYTSTYDEVAVLKRRYDEALSIGNVAG 119

Query: 117 LCVGTRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAK 176
           L VGTRPDCVPDAVL LLADY QQG ++WL+LGLQTA D TLKRINRGHDFA YA+   +
Sbjct: 120 LFVGTRPDCVPDAVLHLLADYQQQGIDVWLDLGLQTARDDTLKRINRGHDFAIYADAVTR 179

Query: 177 ARALGIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGR 236
           AR LGIKVCTHLI+GLPGE   + + + +QVL +G DG+KLH LHIVEGS MA+ WRAGR
Sbjct: 180 ARRLGIKVCTHLILGLPGETSEDFVESHRQVLALGVDGLKLHPLHIVEGSIMARQWRAGR 239

Query: 237 LTVLDQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEK 296
           L  L  D YV+ A  +I+ TP +I+ HRV++ AR P LLAP WC ++W  M AI   L +
Sbjct: 240 LDTLSLDDYVNAAVRLIQRTPADIILHRVTAHARPPLLLAPDWCGHKWLGMGAICSSLAR 299

Query: 297 EGAQGSLLGTPF 308
            G QG L   P+
Sbjct: 300 TGGQGCLTEYPY 311