Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., conserved hypothetical radical SAM protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  201 bits (511), Expect = 2e-56
 Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 6/270 (2%)

Query: 18  LQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNV----ASFADENTQQQSIQAQLKD 73
           L+ R+G +V K+ L  GFSCPNRDGT+ RGGC FCN     +   ++    +        
Sbjct: 15  LRLRFGARVQKVPLDAGFSCPNRDGTLSRGGCVFCNPRGSGSGLGEDGLTLEEQWTVWTG 74

Query: 74  RAGEIKRAKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKL 133
           R    + A  ++AY Q++++TY  +  L+ +         IVG  VGTRPDCV +  L L
Sbjct: 75  RYARTRNAGLFIAYLQSFSNTYGPIDKLRHVLGVLPVLPGIVGAAVGTRPDCVDNERLDL 134

Query: 134 LADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLP 193
           +A       E+WLELGLQ+AHD TL RINRGHD A       +A A G++VC HLI GLP
Sbjct: 135 VAALPLP--EVWLELGLQSAHDATLARINRGHDAAASKRAVREAAARGLRVCAHLIAGLP 192

Query: 194 GEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMI 253
           GE   + L ++  V ++   G+K HGL++ E + +A+ WRAG  T L+++ Y  +    +
Sbjct: 193 GESGDDFLASVDWVNRLPVHGVKFHGLYVCEHTALARQWRAGNYTPLEREDYADLIARAL 252

Query: 254 RSTPPEIVYHRVSSAARRPTLLAPLWCENR 283
               PEIV  R++       LLAP W  ++
Sbjct: 253 PRLRPEIVIQRLTGDPAGDELLAPDWANDK 282