Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 from Methanococcus maripaludis JJ

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 7/137 (5%)

Query: 115 VGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEIT 174
           V L V TRPD   +   K + + ++ G    +ELG+Q+ +D+ L+ + RGH      + T
Sbjct: 208 VALTVETRPDYCNE---KEINEMLKLG-TTRVELGIQSTNDEVLEFVKRGHGTDASIKAT 263

Query: 175 AKARALGIKVCTHLIVGLP---GEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKA 231
              +  G+KV  HLI GLP    E   E + T+ +      D IK +   ++ G+ + + 
Sbjct: 264 QLLKDSGLKVSYHLIPGLPKTTPEMDKETIKTVFENPNFKPDLIKFYPCLVIPGTEVYEL 323

Query: 232 WRAGRLTVLDQDQYVSI 248
           W++G    +  +  V +
Sbjct: 324 WQSGEFNPMTDETAVEV 340