Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 26/227 (11%)

Query: 37  CPNRDGTIGRGGCTFCNVASFADENTQQ-----QSIQAQLKDRAGEIKRAKKYLAYFQAY 91
           CP R        C FC   +   ++ +      + + A L++RA   + A +   Y   +
Sbjct: 25  CPQR--------CVFCAQDAQTGQSVEPVADVLRRVDAILEERARHNRPAVEIAFYGGTF 76

Query: 92  TSTYAEVQ-VLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLELGL 150
           ++   + Q    ++  +  E   +V +   TRPD +P    + LA     G  + +ELG+
Sbjct: 77  SALPEDDQHACLALAARWRERGMVVAVRCSTRPDALPPGKAEALAGL---GMNL-IELGV 132

Query: 151 QTAHDQTLKRINRGHDFACYAE--ITA--KARALGIKVCTHLIVGLPGEERTENLTTLQQ 206
           QT  D  L    RG    C+ +  +TA  + R  G+ +   L+ G+PG         ++ 
Sbjct: 133 QTFDDTALAHAGRG----CHGDDALTAARRVRDAGLGLGLQLLPGMPGVTPDIFRADMKV 188

Query: 207 VLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLDQDQYVSIACEMI 253
           V  +  D ++L+   ++EG+ +A+ WR GR    D D  + +  + +
Sbjct: 189 VASLRPDCLRLYPCLVLEGTGLARLWREGRYGPWDVDTTLDVLADAL 235