Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  191 bits (484), Expect = 3e-53
 Identities = 104/289 (35%), Positives = 169/289 (58%), Gaps = 8/289 (2%)

Query: 18  LQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASF-ADENTQQQSIQAQLKDRAG 76
           L++ +  KV K++L+ GF+CPNRDGT G GGCT+CN  +F  D    ++SI  QL++   
Sbjct: 14  LRKHFPYKVQKISLNAGFTCPNRDGTKGWGGCTYCNNQTFNPDYCRTEKSIATQLEEGKC 73

Query: 77  EIKRA---KKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKL 133
                    KYLAYFQAYT+TYAE++ LK  YE+AL+   +VGL +GTRPDC+P+ +L+ 
Sbjct: 74  FFAHKYPEMKYLAYFQAYTNTYAELEGLKRKYEEALQVDGVVGLVIGTRPDCMPEELLQY 133

Query: 134 LADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKARALGIKVCTHLIVGLP 193
           L +  +  + + +E G+++A D+TL+RINRGH +A   E   +  A GI    H+I+GLP
Sbjct: 134 LEELNRHTF-LMVEYGIESASDETLRRINRGHTYADTVEAVQRTAACGILTGGHVILGLP 192

Query: 194 GEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWR---AGRLTVLDQDQYVSIAC 250
           GE     +     +  +    +K+H L ++ G+ MA  +     G     + D+Y+ +  
Sbjct: 193 GETHDTMVEQAGILSALPLSTLKIHQLQLIRGTRMAHEYEENPEGFHLFTEVDEYIDLVI 252

Query: 251 EMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEGA 299
           + +    P++V  R  S + +  L+AP W    +  +T + +R+++ GA
Sbjct: 253 DYVEHLRPDLVLERFVSQSPKELLIAPDWGLKNYEFVTRLQKRMKERGA 301