Pairwise Alignments

Query, 316 a.a., TIGR01212 family radical SAM protein from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., putative radical SAM protein (RefSeq) from Shewanella sp. ANA-3

 Score =  367 bits (943), Expect = e-106
 Identities = 174/309 (56%), Positives = 228/309 (73%), Gaps = 6/309 (1%)

Query: 5   MHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADENTQQ 64
           M L   VNT G   + +YGE++ KLT+   F+CPNRDGT+GRGGCTFCNVASF+ +  + 
Sbjct: 1   MGLDAYVNTFGAVCKAKYGERLRKLTIDAKFTCPNRDGTLGRGGCTFCNVASFSYQQAET 60

Query: 65  QSIQAQLKDRAGEIKRAK------KYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLC 118
            SI  QL+      K AK      K++AYFQAYTSTY E QVL + Y++A+++++IVGLC
Sbjct: 61  LSISEQLEQGKARYKEAKPKLNADKFIAYFQAYTSTYDEYQVLMAKYDEAVKDSEIVGLC 120

Query: 119 VGTRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKAR 178
           VGTRPDCVPD VL LLA Y Q+G ++WLELGLQTA+D+TL +INRGHDFACY +  A+AR
Sbjct: 121 VGTRPDCVPDNVLDLLASYQQKGVDVWLELGLQTANDRTLHKINRGHDFACYCDTVARAR 180

Query: 179 ALGIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLT 238
           + G+KVCTHLI+GLPGE   + + TLQ VL  G DG+KLH LH+VEGSTMAKAWRAGRL 
Sbjct: 181 SRGLKVCTHLILGLPGETHLDYMATLQAVLAQGVDGLKLHPLHVVEGSTMAKAWRAGRLP 240

Query: 239 VLDQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEG 298
           +L  ++Y +   E++R TP E+++HRV++ A++P LLAP WC  RW  + AI + L ++G
Sbjct: 241 LLSIEEYAACVGELVRHTPKEVIFHRVTAYAKKPILLAPDWCGYRWNGLVAIVEDLARKG 300

Query: 299 AQGSLLGTP 307
            QG+ L  P
Sbjct: 301 GQGAALARP 309