Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (354), Expect = 6e-38
 Identities = 77/215 (35%), Positives = 124/215 (57%), Gaps = 4/215 (1%)

Query: 362 FIWFDVVKSPFRDPASGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVANR 421
           F++ +    P R P +    + ++  DV++      QL+AAN +L+ LS  D LT + NR
Sbjct: 107 FMYQNTTLLPLRSPDNTIKHICLVIYDVTDVATNRHQLQAANAQLQLLSSTDRLTGLYNR 166

Query: 422 RRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANR 481
             ++  L   +  H R G  LS+++ D+D+FK  ND YGH  GD+ ++Q+A    + A R
Sbjct: 167 GHWESDLKAAYARHQRYGHALSLVMLDIDHFKRVNDTYGHQAGDKVIEQVARLLREHA-R 225

Query: 482 HSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVT 541
            SD V RYGGEEFG++L +T  SGA   AER+   V  L + ++   +  R T+SLG+  
Sbjct: 226 DSDVVGRYGGEEFGVVLSDTDSSGAHAFAERMRHSVEALEVLYNDQTI--RFTISLGVAD 283

Query: 542 LIPRPEDVPEQMVELADRALYQAKANGRNQTSIYQ 576
           L  +P +    ++  AD+ALY +K  GRN+ ++++
Sbjct: 284 L-SQPSNDHADLIARADQALYTSKKTGRNRVTVHE 317