Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 849 a.a., PAS domain S-box protein from Synechocystis sp000284455 PCC 6803

 Score =  166 bits (420), Expect = 4e-45
 Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 36/373 (9%)

Query: 223 LLETYQRVLMSPQGENIGLLGISHDVTDWYNMQRQLRE----------EMEKRRDTEVAL 272
           +L T +  +    G+   LLGIS D+TD    Q++L+E          +   R D     
Sbjct: 482 ILHTKKIPICDASGQAQYLLGISADITDLLESQQRLQELARHIPGVIYQFRMRPDGTFHF 541

Query: 273 AQRDTILQNILESSP-----DSIGIFNENMVYQACNQPFVEALGIAEVSDLVGKRLQDVI 327
                 ++ I   SP     D+  +FN            +    +  VS  + +   ++ 
Sbjct: 542 PYASEGIRKIYGVSPEEVKEDATPVFN-----------VLHPDELPGVSRSIYESAANLT 590

Query: 328 PEHIYARLSDTDSQVLHQGKSLRYIDRIERSDGEFIWFDVVKSPFRDPASGTNGVLIMAR 387
           P +   R+   D +V+     L Y      SDG  IW   +K            +LI A+
Sbjct: 591 PWYYEYRVCFADGRVIWV---LGYATPRRESDGGTIWHGYIKDI--TDRKEEEYLLIKAK 645

Query: 388 DVSER-----YLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPL 442
           + +E        A  +LE  N++L +L  +D LT +ANRR F+ ++   W    R   P+
Sbjct: 646 ERAETAEQTLQKAQIRLERFNKKLSQLIDIDGLTKIANRRCFNVRIKQEWRRLSRAQVPI 705

Query: 443 SIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTP 502
           S+I+ D+D FK+YND YGH  GD  L ++A A  + A+R +D VAR+GGEEF +LLP T 
Sbjct: 706 SLIMFDIDCFKNYNDRYGHPEGDLCLIRVAQAARKAASRPADLVARFGGEEFAVLLPETD 765

Query: 503 QSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADRALY 562
             GAI+VAE+I + +  LAI H+ S ++ +IT+SLGI T  P  E +   +++ AD ALY
Sbjct: 766 TKGAIMVAEKIIQAISQLAIAHEASPISGQITISLGIGTQFPSKELISRTLIKQADMALY 825

Query: 563 QAKANGRNQTSIY 575
           +AK  GRNQ  ++
Sbjct: 826 EAKRRGRNQYVVW 838