Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., diguanylate cyclase with GAF sensor from Synechococcus elongatus PCC 7942

 Score =  133 bits (334), Expect = 2e-35
 Identities = 67/172 (38%), Positives = 105/172 (61%), Gaps = 5/172 (2%)

Query: 399 LEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDA 458
           ++A N EL +L++ D+LT + NRR FDE    LW   + + + LS+I+ D+D FK  ND 
Sbjct: 329 VQAVNVELHKLAYTDTLTQIPNRRAFDETFAELWQTALLQQQSLSLIVADIDLFKTVNDR 388

Query: 459 YGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVR 518
           +G+  GD  LK +A        ++ D VAR+GGEEF +LLP+T  SGAI V  ++ E+  
Sbjct: 389 FGYEQGDRCLKHVAQTLKTGIRQNQDFVARFGGEEFVLLLPSTDSSGAIAVVAKLQER-- 446

Query: 519 GLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANGRN 570
              + +  + +    T+S GI T+IP+P+  PEQ+  +A++A+ + K  GRN
Sbjct: 447 ---LANSEADLPVLPTLSYGIATVIPQPQHTPEQLFRVANQAVRRVKERGRN 495