Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score =  121 bits (303), Expect = 1e-31
 Identities = 113/382 (29%), Positives = 176/382 (46%), Gaps = 40/382 (10%)

Query: 219 GRSCLLETYQRVLMSPQGENI---------GLLGISHDVTDWYNMQRQLR------EEME 263
           G    ++   R L+ P  E +         G LG+   +T  Y      R      E   
Sbjct: 257 GVEVTVQASDRTLLQPWREKLAFILVLQVFGTLGLGFGITSLYYQMHHRRVSLLDLERAN 316

Query: 264 KRRDTEVA-----LAQRDTILQNILESSPDSIGIFNENMVYQACNQPFVEALGIAEVSDL 318
              +++VA     LA+ +  ++  + ++ D++ I ++  +    N    E  G  +V ++
Sbjct: 317 ASLESKVAERTRQLAEGEERMRGFIMAARDAVVIIDQKGIISEFNPSATELFGY-DVEEV 375

Query: 319 VGKRLQDVIPEHIYARLSDTDSQVLHQGK--SLRYIDRIERSDGEF---IWFDVVKSPFR 373
            G+ +  ++P   YAR  D D   L +GK    R I R     G       F +  +   
Sbjct: 376 RGQSVNMLMPA-TYAR--DHDGH-LRKGKPSGQRAIGRGREMIGRRKNGSEFPIELTVGT 431

Query: 374 DPASGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWH 433
               GT   + + RD++ER       +A  + L RL+ +D LT V NRR F E+   L  
Sbjct: 432 QSFDGTRVHIGVIRDITER-------KATEETLRRLANIDGLTGVLNRRSFTEESELLLS 484

Query: 434 LHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEE 493
           L  R G+ LS+++ D D+FK  ND YGH  GD  LK +      V  R +D + R GGEE
Sbjct: 485 LANRHGRRLSMMIVDADHFKGVNDTYGHDAGDRVLKALTGEIAGVL-RKTDLLGRIGGEE 543

Query: 494 FGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQM 553
           F ILLP T Q GA  +A R+   +R L +P     V  ++TVS+G V+         + M
Sbjct: 544 FAILLPETDQEGAEGLAWRVVLAIRALEVPLPEGGVL-KVTVSVG-VSCRNTEAATFDWM 601

Query: 554 VELADRALYQAKANGRNQTSIY 575
           ++ AD ALY AK  GR++ + +
Sbjct: 602 LKEADTALYAAKHGGRDRVACF 623