Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., GGDEF domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  127 bits (319), Expect = 7e-34
 Identities = 94/295 (31%), Positives = 142/295 (48%), Gaps = 47/295 (15%)

Query: 319 VGKRLQDVIPEHIYARLSDTDSQVLH-----QGKSLRYIDRI------ERSDGEFIWFDV 367
           + K + D + E     L+D D   LH     QG++   IDRI      E  D   +  + 
Sbjct: 48  LNKAINDTLAER--GNLTDADLDQLHDTYLTQGRTTDRIDRIGARVANEIDDIMALLAET 105

Query: 368 V--KSPFRDPASGTNGVLIMARD------VSERYLAA------------EQLEAANQELE 407
           +   + F D   G +  L +A D      + ER +              E+L  + QE+ 
Sbjct: 106 LGNTASFGDDLRGESQKLSLATDHDQIKAIVERLVVTTREMQQANSALEERLSTSKQEIA 165

Query: 408 RL----------SFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYND 457
            L          S  D LT + NR+ FD  +           +PLS+++ D+D+FK +ND
Sbjct: 166 NLQVSLDAIRAESLTDPLTGLGNRKHFDRTVQEAIRNAGASQQPLSLLMMDIDHFKSFND 225

Query: 458 AYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKV 517
            YGHL GD+ L+ + +   Q + +  D  ARYGGEEF ++LPNTP   AI+VA+ I   V
Sbjct: 226 TYGHLTGDQVLRLVGMTLKQ-SIKGQDFTARYGGEEFAVVLPNTPMRQAIIVADNIRRLV 284

Query: 518 RGLAIPHDHS-KVADRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANGRNQ 571
               +    + ++  R+T+S G+ TL  +P D  E ++E AD  LY AK NGRN+
Sbjct: 285 MSKELKKKSTGEILGRVTLSAGVSTL--KPNDDAEALIERADACLYAAKRNGRNR 337