Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (325), Expect = 1e-34
 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 19/213 (8%)

Query: 374 DPASGTNGVLIMARDVSERYLAAEQLEA----ANQELERLS----------FLDSLTHVA 419
           DP +    V  +A +VS+  ++  Q+EA     NQE+  L             D LT + 
Sbjct: 134 DPKTLERLVDTLAEEVSQVVISNRQMEANLKTMNQEVAALKAEMEDLNIAVMTDQLTSLR 193

Query: 420 NRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVA 479
           NRR FDE++        RE +  S++L D+D FK +ND +GHL+GD+ L  IA+A  Q  
Sbjct: 194 NRRAFDEEVLGHIQRFRREQRLSSLLLVDIDNFKQFNDTHGHLVGDKVLAYIALALKQGV 253

Query: 480 NRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKV--RGLAIPHDHSKVADRITVSL 537
            +  D VARYGGEEF ILLP+T  SGA++VAE++  ++  R L+I  D       ITVS+
Sbjct: 254 -KGDDFVARYGGEEFVILLPDTEHSGAMVVAEQLRARIAERHLSIGKDKKLSLGAITVSI 312

Query: 538 GIVTLIPRPEDVPEQMVELADRALYQAKANGRN 570
           G+ TL  R +D  E  +  AD ALY+AK+ GRN
Sbjct: 313 GVATL--RLDDDRESYLVRADEALYRAKSAGRN 343