Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (327), Expect = 1e-34
 Identities = 72/170 (42%), Positives = 104/170 (61%), Gaps = 2/170 (1%)

Query: 404 QELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLM 463
           Q+ +R++ +D LT ++NRR FDE L        R G PLS+IL DVD+FK  ND+ GH  
Sbjct: 208 QQFKRMALIDGLTDLSNRRHFDEVLALEIKAAERTGDPLSMILLDVDFFKRLNDSLGHSD 267

Query: 464 GDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIP 523
           GD  L ++      VA+R  D  ARYGGEEF I+LP+T  SGA  +AE+I  +++   IP
Sbjct: 268 GDRCLVRLGEVLHGVASRPRDLAARYGGEEFAIILPDTDLSGARHIAEQIRYELKAAEIP 327

Query: 524 HDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANGRNQTS 573
           H  S +   +TVS G+    P  +   ++++  AD+ LYQ+KA GR++ S
Sbjct: 328 HPDSTLGAYVTVSQGVCLWQPGLD--ADELLASADQLLYQSKAQGRDRCS 375