Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  129 bits (324), Expect = 2e-34
 Identities = 73/218 (33%), Positives = 121/218 (55%), Gaps = 4/218 (1%)

Query: 361 EFIWFDVVKSPFRDPASGTNGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVAN 420
           +F++ +V   P          + ++  DV++  +   QL+AAN+ LE LS  D LT + N
Sbjct: 107 DFMYQNVTLLPLSSLTGQITHISMIIYDVTDVAINKLQLKAANERLEHLSQTDGLTQLHN 166

Query: 421 RRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVAN 480
           RR +   +   +  H R G+P ++++ D+D+FK  ND YGH+ GD  ++ ++    Q + 
Sbjct: 167 RRHWQLCMQKEFDRHARYGEPTTLVMFDIDHFKRINDTYGHIAGDRVIQHVSHILRQ-SL 225

Query: 481 RHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIV 540
           R +DC  RYGGEEF ++L NT    A+  A+R+ EK+    +  + + +  ++TVS+GI 
Sbjct: 226 RDTDCAGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASELRFESAIL--KVTVSIGIC 283

Query: 541 TLIPRPEDVPEQMVELADRALYQAKANGRNQTSIYQPN 578
            +     +   Q +  AD ALYQAK  GRN   I+ P+
Sbjct: 284 GIDEHLSN-SAQWLGQADSALYQAKQKGRNCCVIFNPD 320