Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  153 bits (387), Expect = 9e-42
 Identities = 81/181 (44%), Positives = 111/181 (61%), Gaps = 1/181 (0%)

Query: 398 QLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYND 457
           +L  AN  LE+LS  D LT++ NRR FD+ L   W    R   PLS+I+ D+D+FK +ND
Sbjct: 161 ELAEANNRLEKLSNTDGLTNIGNRRLFDQMLQKEWSRGQRNNTPLSLIMLDIDHFKLFND 220

Query: 458 AYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKV 517
            YGHL GD+ LK +A   +Q   R  + VARYGGEEF ILLPNT    A+  A+ +H+ +
Sbjct: 221 HYGHLAGDDCLKMLANGLSQSGRRAGELVARYGGEEFVILLPNTDLQTALDTAKHVHQLI 280

Query: 518 RGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANGRNQTSIYQP 577
           + LAIPH  + +   +TVS+G+  L+P  +    ++V  AD ALY AK+ GRN      P
Sbjct: 281 QSLAIPHIKTNLG-IVTVSVGVACLLPSDKHNALELVHQADTALYLAKSAGRNCIRSAPP 339

Query: 578 N 578
           N
Sbjct: 340 N 340