Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  145 bits (366), Expect = 5e-39
 Identities = 89/214 (41%), Positives = 122/214 (57%), Gaps = 11/214 (5%)

Query: 371 PFRDPASGTNGVLIMARDVSE----------RYLAAEQLEAANQELERLSFLDSLTHVAN 420
           PF  P  G   +L+++   S           R+L A Q  A     E+ + +D LT + N
Sbjct: 261 PFHMPTQGEAVMLLVSFAASTTLTTLGLSLYRHLLA-QAGARATMWEQRAGIDPLTGLCN 319

Query: 421 RRRFDEQLHTLWHLHVREGKPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVAN 480
           R RFDE L        R+  PLS+++ D D+FK YND YGH+ GD  LK++A     VA+
Sbjct: 320 RARFDEVLLAELQRLQRQDSPLSLMMFDADHFKPYNDMYGHVAGDACLKRVAGVLRAVAH 379

Query: 481 RHSDCVARYGGEEFGILLPNTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIV 540
           R SD VARYGGEEF  +LP T +  A  +AE++ + VR LAIPH  S VA  +TVS G+V
Sbjct: 380 RASDVVARYGGEEFVCILPGTDRDSAYALAEKVRQGVRALAIPHVGSPVAGVLTVSAGVV 439

Query: 541 TLIPRPEDVPEQMVELADRALYQAKANGRNQTSI 574
           T+       P+++V   DRALYQAK  GR++  +
Sbjct: 440 TVHGCDGLDPQEVVAQVDRALYQAKGAGRDRVMV 473