Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., response regulator receiver modulated diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  143 bits (361), Expect = 9e-39
 Identities = 83/192 (43%), Positives = 117/192 (60%), Gaps = 6/192 (3%)

Query: 380 NGVLIMARDVSERYLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREG 439
           N ++  AR V  +YL   Q +     L  ++ LDSLT VANRR+F+++L  +W    R  
Sbjct: 120 NPIITSAR-VKNQYLLKRQSDV----LHSIALLDSLTGVANRRQFEQRLPEIWRHCSRNQ 174

Query: 440 KPLSIILCDVDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLP 499
             LS+I+ DVD+FK YND YGH  GD+ L+ +A A   +  R +D +ARYGGEEF  +LP
Sbjct: 175 AYLSVIMLDVDFFKRYNDRYGHQEGDQCLRLVADAVKGMLKRPNDLIARYGGEEFICILP 234

Query: 500 NTPQSGAILVAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADR 559
               SGA+ +A+ + + V  L + H  S+  + +TVS GI T+ P  E   E +VE+AD+
Sbjct: 235 EAKLSGAMRLAQAMVDAVHALHLEHLDSEFGE-VTVSAGIATIQPLAEQSWESLVEVADQ 293

Query: 560 ALYQAKANGRNQ 571
            LY AK NGRNQ
Sbjct: 294 QLYIAKHNGRNQ 305