Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  129 bits (325), Expect = 1e-34
 Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 14/298 (4%)

Query: 279 LQNILESSPDSIGIFNENMVYQACNQPFVEALGIAEVSDLVGKRLQDVIPEHIYARLSDT 338
           ++  ++   + + + N N   ++CNQ   E L   + S L G+  ++ + EH  AR  + 
Sbjct: 46  IELFIQHLTEPVILVNANGFIRSCNQRSAELLDCPQAS-LKGQDWRNFLTEHHQARYDNL 104

Query: 339 DSQVLHQGKSLRYIDRIERSDGEFIWF-----DVVKSPFRDPASGTNGVLIMARDVSERY 393
            S  +  G +  +  +    +   I       DV  S    P+     V++M  D+++  
Sbjct: 105 LSHDVQLGTNCGHPVQHPAQETTLICASGKAKDVELSISYIPSHEPVFVMVM-HDLTQH- 162

Query: 394 LAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCDVDYFK 453
                 +A N +L +L+  DSLT +ANRR FDE L   W     + +P+S+++ DVDYFK
Sbjct: 163 ------KAENLKLRKLAATDSLTQLANRRYFDEMLQQQWEECTAKLRPISVVIIDVDYFK 216

Query: 454 DYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAILVAERI 513
            +ND +GH+ GDE L++IA     +        ARYGGEEF ++LPN     A+ +A++I
Sbjct: 217 VFNDQFGHIQGDECLRKIAKVIANIVPIDIGLAARYGGEEFALILPNHNAKMALTIAQKI 276

Query: 514 HEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANGRNQ 571
            +++  +       +    I+ S GI + +         MV  AD ALY+AKA+GR++
Sbjct: 277 QQEINDIRFTDQGLRDYVSISASQGIASEVNGQFRTSLAMVCAADTALYRAKADGRDR 334