Pairwise Alignments

Query, 579 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., diguanylate cyclase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  121 bits (304), Expect = 4e-32
 Identities = 69/187 (36%), Positives = 109/187 (58%), Gaps = 9/187 (4%)

Query: 389 VSERYLAAEQLEAANQELERLSFLDSLTHVANRRRFDEQLHTLWHLHVREGKPLSIILCD 448
           +S + +A  +L+   ++L   S  D+LT V NRR FD +    +    R G+   + L D
Sbjct: 145 LSRQVIAILELKKVGEQLHNTSMTDALTGVNNRRAFDLKFEAEFARWQRTGQSFVLALID 204

Query: 449 VDYFKDYNDAYGHLMGDETLKQIAIAFTQVANRHSDCVARYGGEEFGILLPNTPQSGAIL 508
           +D+FK +ND+YGH  GDE L Q+A  F Q  +R+ D  ARYGGEEF ++LP T  + A  
Sbjct: 205 IDHFKSFNDSYGHAAGDEALSQVAALF-QRHSRNYDFFARYGGEEFVLILPGTDTASANK 263

Query: 509 VAERIHEKVRGLAIPHDHSKVADRITVSLGIVTLIPRPEDVPEQMVELADRALYQAKANG 568
             E++        +  +H  +  ++TVS+G+ +      D  +Q++E+AD+ LY+AK  G
Sbjct: 264 TLEKLR------LVVANHEWLLRQLTVSIGLAS--ADLFDDKKQLLEVADQMLYKAKTQG 315

Query: 569 RNQTSIY 575
           RNQTS++
Sbjct: 316 RNQTSVF 322