Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 973 a.a., sensor histidine kinase/response regulator TorS (RefSeq) from Shewanella amazonensis SB2B

 Score =  224 bits (570), Expect = 2e-62
 Identities = 166/534 (31%), Positives = 280/534 (52%), Gaps = 51/534 (9%)

Query: 274 ESLEKASRDKTTFISTISHELRTPLNGIVGLSRML-LDTPLSGEQRKHLQTINVSAVTLG 332
           E+ E AS+ K+ F++T+SHE+RTPLNG++G   +L  D  L+  Q + L     SAV L 
Sbjct: 457 EAAENASQAKSRFLATMSHEIRTPLNGLMGTLELLDKDKSLTESQHQLLGLSRYSAVLLQ 516

Query: 333 NIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLV 392
            + +DI+D  + ++ +L+  PA ++F + + E+  +    A   GL  +L   T++P  V
Sbjct: 517 TLLSDILDFSRLEKGQLKAQPAPVDFPQLLDEVMNVMLAGASLAGLGLEL-LTTNVPQYV 575

Query: 393 EVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHAEITIEVEDTGIGIPEAEQEK 452
            +D  +LRQVL NLL NA+KFT+ G VV+ VSAE    H  +T    DTG+G+ EA +++
Sbjct: 576 SLDGPKLRQVLLNLLGNAIKFTQRGSVVLRVSAEGQRLHFSVT----DTGVGMDEATRQR 631

Query: 453 IFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGG---------DISVNSEEGFGSTFT 503
           +F  Y   ++G     A GTG+GLA+SR+L+ LM            I V S +G GS F+
Sbjct: 632 LFTPY---ETGHVQGRARGTGLGLAISRELVCLMADVGPESVNEVGIQVESLQGVGSCFS 688

Query: 504 VTIRVPLL-AEAPIEIEPQE--PQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGE 560
            ++  PL+  +AP E   Q     +   + +VED ++N  VAR  L ++GH+ + A    
Sbjct: 689 FSL--PLVHCDAPAEAAAQSFVAVSPRRVLLVEDNQVNALVARGYLATLGHEASWAWDLA 746

Query: 561 EAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSLPP---LVALTANVLKDK-EEY 616
           EA +     ++D + LD+QLPD  G       R+   SLP    + A TA V  D    Y
Sbjct: 747 EARRLLAAEQFDALMLDMQLPDGDG-------RSLLPSLPAGILVAAFTAQVDIDAVAGY 799

Query: 617 RQKGMDAAISKPLSVAAVREVIAKMTQHHAGES-VAKVKSNKEKELPDDLYQQ------- 668
           ++ G++  ++KPLS+AA+   +   +Q    ++ V++  ++    + D            
Sbjct: 800 QRAGVETVLAKPLSLAALGHWLGDASQTDVSQTDVSRADASLAVPVTDAAVHNALRTANP 859

Query: 669 -LLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAVLDSNMVAKDQEGIVSEAHKIKGA 727
            LLD+E L+  ++I+G   + +    F  S  A  A  +  +   +++   +  H +KGA
Sbjct: 860 GLLDIEQLELDLDILGRDTLEEMAQQFASSSEAQFAAFERGVATLERQ---TRLHSLKGA 916

Query: 728 AGSVGLKRIQKIAQKAQSPEAPAWWENISDWVE----EIKNEYQSDIALLKRWL 777
           + S+GLK + ++A + +  +        + W E    E++  +Q+ +  L  WL
Sbjct: 917 SASMGLKALAQLAAELEKVQVSGKLTE-TQWQEQRLPELRELWQASLQALAEWL 969