Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1287 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  217 bits (553), Expect = 3e-60
 Identities = 157/568 (27%), Positives = 282/568 (49%), Gaps = 61/568 (10%)

Query: 126 EEAREEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAME 185
           E+A   A A LE  V++R     +L +   L R+ +DA+   I   + +G  +  N + E
Sbjct: 360 EKALLSAKAKLEQLVHERTS---QLEKMGVLQRTILDAASYAIIATDTEGIITVFNPSAE 416

Query: 186 ELTGKRESELVGL-TPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFF-- 242
            L G    E+VGL TP          +I   +++V    T ++ E   +   G  +F   
Sbjct: 417 RLLGFTAKEMVGLQTP----------AIFHLEEEVVRRATQLSEELGTKIEPGFDAFVAK 466

Query: 243 -----------------------ELRKVPFYNKDGRHLGLVGFGRDITERKRHEESLE-- 277
                                  +L     Y +D   +G +G   D+TE+ + E+ L   
Sbjct: 467 SRRGKEDTNNWTYVSKSGARITVKLSVTTLYGEDKDIMGYLGIAYDLTEQLKREQELADA 526

Query: 278 -----KASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLG 332
                +ASR K+ F++ +SHE+RTP+N ++GL +M L T L    R +L+    +A +L 
Sbjct: 527 REQALQASRAKSDFLANMSHEIRTPMNAVLGLLQMTLQTELPPRPRDYLEKTQQAAKSLL 586

Query: 333 NIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLV 392
            + NDI+D  K +  ++EL     + ++ + ++  + +   +QK +    +    +P  +
Sbjct: 587 ALLNDILDFSKIEAGRIELERQGFSLQQLLGDMGSILSSQVQQKDIELVYQVAPSVPDQL 646

Query: 393 EVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAEC-DAQHAEITIEVEDTGIGIPEAEQE 451
             DS RLRQ+L N+L+NA+KFT++G ++  + A+  D     + IE++D+GIG+   +Q 
Sbjct: 647 IGDSLRLRQILLNVLTNAIKFTEKGDIITRIDADLGDDGTCHLHIEIQDSGIGMTNEQQA 706

Query: 452 KIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRVPLL 511
            IF  + Q  S     +  GTG+GLA++R+L+ LM G+I V S  G GSTFT+ +++   
Sbjct: 707 IIFKGFSQADSSISRRYG-GTGLGLAITRELVHLMQGEIRVTSSPGVGSTFTIDVQLGFD 765

Query: 512 AEAPIEIEPQEPQTELNIFMVEDIELNITVARSLLESMGHKVTV---AMTGEEAIQGFNP 568
           A    +  P    + + + +VED   +  V   LL  +G +VT     +T  + I+   P
Sbjct: 766 A---TKYRPGARFSGVRVLLVEDNHTSRLVFSELLRDLGCEVTALNNGLTAMKTIERMAP 822

Query: 569 TEYDLVFLDIQLPDMTGFDIAHYYRTHYSSL---PPLVALTA---NVLKDKEEYRQKGMD 622
             +D++  D QLP + G ++A + R H  SL   P ++ +TA    +L+ + ++R++  D
Sbjct: 823 DSFDVLLADWQLPGLDGLELASWIR-HLDSLSRQPGIIIVTAFSQAMLEAQLKHREEEFD 881

Query: 623 AAISKPLSVAAVREVIAKMTQHHAGESV 650
           A + KP++   V   +  + + H  + +
Sbjct: 882 ATLIKPVTREMVSRCLQSVLERHNNDGL 909



 Score = 68.9 bits (167), Expect = 2e-15
 Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 5/118 (4%)

Query: 529  IFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDI 588
            + +VED   N  VA SLL  +G +V  A+ G +A++  +  ++DLV +DIQ+P M G+  
Sbjct: 926  LLLVEDNATNRLVATSLLGQLGAEVIEAVDGFQALKLLSRQQFDLVLMDIQMPGMDGYQT 985

Query: 589  AHYYRTHYSSLP-PLVALTANVL-KDKEEYRQKGMDAAISKPLSVAAVREVIAKMTQH 644
                R        P++A+TAN + +DK+  R  GM+  ISKP     + EV  K+ Q+
Sbjct: 986  TRKIRNELMLTDLPIIAMTANAMPEDKQACRDAGMNCHISKPFE---IDEVATKLLQY 1040