Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  198 bits (504), Expect = 1e-54
 Identities = 159/516 (30%), Positives = 249/516 (48%), Gaps = 53/516 (10%)

Query: 268 ERKRHEESLEKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVS 327
           E  R  ++ + A+R K  F++T+SHE+RTP+N ++G++ +LLD PL   Q  + +TI  S
Sbjct: 490 ELVRARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTGLLLDGPLEPRQIDYARTIQRS 549

Query: 328 AVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGL--RFDLERL 385
              L  + NDI+D  + D  +L L     +    V  +  L  + A  K L  R DL+R 
Sbjct: 550 GEHLLGLINDILDFSRIDTGRLVLVDRDFSLSHEVQAVVSLCGVAASAKRLSVRIDLDRA 609

Query: 386 TDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVM---TVSAECDAQHAEITIEVEDTG 442
             L      DS RLRQ+L NL+ NA+KFT +G V +    +  E D     + + V DTG
Sbjct: 610 --LAPGYRGDSQRLRQILVNLVGNAVKFTDKGMVTVQGDVLKIENDIHW--LRLRVVDTG 665

Query: 443 IGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTF 502
            GIP      +FA + Q+       H  GTG+GLA+SR+L +LMGGDI+V+S  G GS F
Sbjct: 666 CGIPRERFNDLFAAFQQLDGSATRTHG-GTGLGLAISRKLARLMGGDITVSSTPGEGSVF 724

Query: 503 TVTI-RVPL---------LAEAPIEIEPQEPQTE----------LNIFMVEDIELNITVA 542
           +V +  VPL         L +   E   + P  +          L + + EDI  N  + 
Sbjct: 725 SVVVPMVPLSRTPAPDGTLGDGDAERGEEPPAADVPTEAAASRALVVLVAEDILENQILV 784

Query: 543 RSLLESMGHKVTVAMTGEEA---IQGFNPTEYDLVFLDIQLPDMTGFDIAHYYR-----T 594
           +++LE  GH+V +A  G EA   ++G +P   D+V +DIQ+P M G D     R      
Sbjct: 785 QAVLEKQGHRVILAANGREALAKLRGADPV--DVVLMDIQMPVMDGLDACRAIRGLPPEV 842

Query: 595 HYS-----SLPPLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVREVIAKMTQHH--A 646
           H+S     +  P++A TA+ L  D+E +   GM+  ++KPL+   +R ++  +       
Sbjct: 843 HFSDGRPIAGVPIIAFTADALPGDRERFLSAGMNEHLAKPLNARRLRALLGDIAAGRPLT 902

Query: 647 GESVAKVKSNKEKELPDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAVLD 706
             S A     K  E P    ++LLD E L      +G    I  +   E+++      L 
Sbjct: 903 PRSSAAPSPRKSLEAP----RRLLDPEALAQLRTSLGEDYPI-YLRAAEEALRHRARALP 957

Query: 707 SNMVAKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQK 742
             +     E      H ++G   + G++    + Q+
Sbjct: 958 EALARGAFEEASQLLHGLRGTLAAFGMEAEATLCQR 993