Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 866 a.a., PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  229 bits (583), Expect = 6e-64
 Identities = 168/553 (30%), Positives = 265/553 (47%), Gaps = 53/553 (9%)

Query: 118 EIEERIKAEEAREEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEF 177
           ++ +R+KAE A       LE +V  R +   +LAE  A  R+ I    D +   + +G  
Sbjct: 322 DVTDRVKAEIALRSLNESLEAQVLTRTR---DLAESEARTRAIIATMVDGLIVMDDQGRI 378

Query: 178 SGCNRAMEELTGKRESELVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDG 237
              N A + + G  ESE+VG             +++ + +    +        W    DG
Sbjct: 379 DLFNAAAQRIFGYDESEVVGQNA----------ALLMSAEDAAGHAEPFGLHLW----DG 424

Query: 238 RKSFFE-LRKVPFYNKDGRHLGLV---------------------GFGRDITERKRHEES 275
           R       RKV    K+G    L                      G  RDI+++ RHE  
Sbjct: 425 RSPLLNGTRKVIGRRKNGASFPLAVAISALPAPPPGGAPARRLFTGVVRDISDQIRHESD 484

Query: 276 LEK-------ASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSA 328
           L K       A+R K+ F++ +SHELRTPLNG++G++ +L DTPL  EQR++ +TI +SA
Sbjct: 485 LRKVKDEAEVANRAKSDFLAVMSHELRTPLNGVLGMADLLCDTPLDAEQRRYTRTIAISA 544

Query: 329 VTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDL 388
             L  I NDI+D+ K +   L+L     +    +  +  L    A  K +          
Sbjct: 545 EALLVIINDILDLSKIEAGHLDLESRPFDPATLLEGVRTLMEGPARDKAIALRTSIEGAK 604

Query: 389 PSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHAEITIEVEDTGIGIPEA 448
           P L   D  RLRQ+L NL +N +KFT++G + + + A        +  EVEDTGIGIP+ 
Sbjct: 605 PPLRLGDEGRLRQILLNLANNGVKFTEKGSLTLRLKA---GTGGALRFEVEDTGIGIPKE 661

Query: 449 EQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRV 508
           +Q+ +F  + QV +        G+G+GL++ R+L+ LMGG +  +S  G GS F   + +
Sbjct: 662 KQDTLFHDFTQVSASTARRFG-GSGLGLSICRRLVGLMGGRLGFDSTPGVGSLFWFEVDL 720

Query: 509 PLLAEAPIEIEPQEPQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNP 568
           P +  +     P      L+I +VED E+N  VA  LL  +GH+VT    G  A++  + 
Sbjct: 721 PEVVASQSPPPPPFQGPPLSILVVEDNEINRQVALGLLTKLGHRVTCVDDGAAAVRVVDT 780

Query: 569 TEYDLVFLDIQLPDMTGFDIAHYYRTHYSSLP--PLVALTANVLK-DKEEYRQKGMDAAI 625
             +DL+ +D+Q+P M G++     R   + +   P+VA+TAN    D       GM   +
Sbjct: 781 MPFDLILMDVQMPGMDGYEATRLIRGKPAPVGGLPIVAMTANATSGDVAAAMAAGMTGYL 840

Query: 626 SKPLSVAAVREVI 638
           SKP++   + E +
Sbjct: 841 SKPITRKRLAEAL 853