Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1206 a.a., transporter substrate-binding domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score =  212 bits (540), Expect = 9e-59
 Identities = 150/534 (28%), Positives = 259/534 (48%), Gaps = 24/534 (4%)

Query: 136  LENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESEL 195
            L N +++R + +  L+++   +   ID +P  IY R+ +G    CN A  ++ G +  ++
Sbjct: 559  LRNLIHKRAQAERALSDQMRFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDV 618

Query: 196  VGLT--PWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKD 253
            +G T    D      AQS       +        +++ L+ P G         +P+ + +
Sbjct: 619  IGKTVVETDTGNPPQAQSFHADYLSLMERGEPQIHDRVLKVPGGGVLTIYQWMLPYRDSN 678

Query: 254  GRHLGLVGFGRDITERKR-------HEESLEKASRDKTTFISTISHELRTPLNGIVGLSR 306
            G  +G++    D++ER+R        +E  + A+R KTTF++T+SHE+RTP+N ++G+  
Sbjct: 679  GNVVGMIAGWVDVSERQRLLGQLQEAKEEADAANRAKTTFLATMSHEIRTPMNAVIGMIE 738

Query: 307  MLLDTPLSGE-QRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEI 365
            +       G   +  L+  ++++ ++  +  DI+D+ + +   L L  A  N  E +A +
Sbjct: 739  LAQKNAEQGRVDQDALEVASMASRSMLELIGDILDIARIETGHLSLTLAPANLHEMLASV 798

Query: 366  EVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSA 425
              +   +A  KGL   +E    +   V +D  R +QV+ NLL NA+KFT  G V   + A
Sbjct: 799  ARVFEGLARDKGLLLHVELDPMIDRSVLIDPMRFKQVVSNLLGNAIKFTATGQV--RLGA 856

Query: 426  ECDAQHA----EITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQ 481
            +C    A     + + VEDTGIGI   +Q+++F  + Q  S  D     G+G+GL +SR 
Sbjct: 857  QCTPALASDPLNLRLYVEDTGIGISAEDQQRLFNPFIQ-GSNNDQSARSGSGLGLVISRN 915

Query: 482  LIKLMGGDISVNSEEGFGSTFTVTIRVPLLAEAPI--EIEPQEPQTELNIFMVEDIELNI 539
            L ++MGG + ++S  G G+   VT+ + L   AP+     P  P   L++ +V+D   N 
Sbjct: 916  LCEMMGGQLHLSSVLGKGTRVDVTLALELATAAPLSSSAPPVPPAHALSLLVVDDYPANR 975

Query: 540  TVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSL 599
             +    L  +GH++  A  G E    +    +D V  D  +P M G+ +A   R     L
Sbjct: 976  LLLTRQLSFLGHRIVTAEDGAEGFALWQAGHFDGVITDSNMPVMDGYTLARDIRAQERRL 1035

Query: 600  P----PLVALTANVL-KDKEEYRQKGMDAAISKPLSVAAVREVIAKMTQHHAGE 648
                  L+  TAN   ++ E  RQ GMD  + KP  +  +R  +A  T   A E
Sbjct: 1036 GLVPCLLLGFTANAQPEETERCRQAGMDGCLFKPTGLDDLRVALASRTASAAVE 1089