Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  233 bits (594), Expect = 3e-65
 Identities = 183/568 (32%), Positives = 287/568 (50%), Gaps = 34/568 (5%)

Query: 81  EESRQRLSKLVSKLKDMRSRD-QELNQKLQQNIVKLNQEIEER------IKAEEAREEAM 133
           EE R RL+    +L +++  +    N+KL ++ + L ++I         ++ E A+ ++ 
Sbjct: 9   EERRARLA--AERLLELKQAELSAANRKLGRHALALTRQIGATQAEVATVRDENAKVKSD 66

Query: 134 ADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRES 193
               NE       +VE AER   L   I A  D   + +A  +  G N A  +L    E 
Sbjct: 67  LSTANE-------KVERAERR--LWHSIQAFQDGFAFFDADSKLIGANTAYLDLFDGLEE 117

Query: 194 ELVGLTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFEL---RKVPFY 250
              G++   + +    + +V T +Q  ++  A   E+WL  P        +   R +   
Sbjct: 118 VTPGVSYVRILQILTDEGLVNTGEQDPDHWRAQMSERWLS-PSPEPVVVRMWDDRYLRLL 176

Query: 251 NKDGRHLGLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPLNGIVG 303
           ++ G    +V    DIT   ++EE L       E A+R K+ F++ +SHE+RTP+NG+VG
Sbjct: 177 DQRGHGGDMVSLALDITSTVQYEEELQAARERAEAANRAKSAFLANMSHEIRTPMNGVVG 236

Query: 304 LSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVA 363
           ++ +L DT LS EQ+ +  TI  S   L  I ND++D  K + +KLEL P   + E  V 
Sbjct: 237 MAELLSDTNLSDEQQLYANTIKNSGEALLVIINDVLDYSKIEAQKLELHPEPFDLERSVH 296

Query: 364 EIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTV 423
           E+ +L    A  KGL   L+    LP+    D  R+RQVL NL+ NA+KFT EG V + +
Sbjct: 297 EVLMLLQPTARDKGLTLLLDYDLFLPTSFVGDPGRIRQVLTNLVGNAVKFTSEGHVALQI 356

Query: 424 SAECDA--QHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQ 481
           +   +A  +   I + +EDTGIGIPE + + IF  + QV+  + N    GTG+GLA+S++
Sbjct: 357 TGISNAGDKICSIHVTIEDTGIGIPEEKVQDIFGEFNQVEDER-NRQFEGTGLGLAISKR 415

Query: 482 LIKLMGGDISVNSEEGFGSTFTVTIRVPLLAEAPIEIEPQEPQTELNIFMVEDIELNITV 541
           LI+LMGG+I V S+EG GS F   + +PL   A   I P  P+    I +++   +   V
Sbjct: 416 LIELMGGEIWVESQEGKGSCFGFRMELPLAEGASTSI-PTLPKGLCQIAVIDSQSVMRDV 474

Query: 542 ARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSLPP 601
               L  +G +VTV   G  AI G  P   DLV  D QLPD  G ++A   R+   +  P
Sbjct: 475 LSKQLAMLGLEVTVFDNGAAAIAGM-PDGVDLVVCDEQLPDQNGVELAQKLRSGPFAQVP 533

Query: 602 LVALTANVLKDKEEYRQKGMDAAISKPL 629
           ++ L+++         Q   D+ + KP+
Sbjct: 534 ILMLSSDPTAPSNSDVQSVTDSVLLKPI 561



 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 509 PLLAEAPIEIEPQEPQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNP 568
           P  A A   +     Q  + +   ED   N  V R +++ +   +     G EA++ +  
Sbjct: 609 PAPAAALTAVSTCPTQRLMRVLAAEDNRTNQLVFRKMVKDLNIDLQFVSNGIEAVEVYQS 668

Query: 569 TEYDLVFLDIQLPDMTGFDIAHYYRT--HYSSL-PPLVALTANVLK-DKEEYRQKGMDAA 624
            + DL+F+DI +P M G +     R   H + +  P+VALTA+ +  D +     G+D  
Sbjct: 669 FQPDLIFMDISMPVMDGKEATQKIRALEHGTGIYTPVVALTAHAMAGDSDGILAAGLDHY 728

Query: 625 ISKPLSVAAVREVI 638
           ++KPL  A + E I
Sbjct: 729 LTKPLRKALIHERI 742