Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  197 bits (502), Expect = 3e-54
 Identities = 158/609 (25%), Positives = 293/609 (48%), Gaps = 29/609 (4%)

Query: 139  EVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGL 198
            ++ +R++   ELA+R A  R+  D +   I   + +G    CN    +        L G 
Sbjct: 888  DISERKQMDRELAKREAHFRALFDNAGIGIVNVDDRGVILDCNEQFSQYLQLPIERLKGS 947

Query: 199  TPWDVYRKEIAQSIVETDQQVFNNNT-AITYEQWLEYPDGRKSFFELRKVPFYNKDGRHL 257
              +D    E       + + +  +   ++  E  L    G   + ++      +K G + 
Sbjct: 948  LFFDYQDPEQGLEAKNSFKHLMGDGADSVKLEIRLLNQAGEARWMDVNMTGLSDKQGEYR 1007

Query: 258  GLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPLNGIVGLSRMLLD 310
              V    DI+  K   E L       + AS+ K+ F++ +SHE+RTP+N I+G+S++ L 
Sbjct: 1008 SAVLSMADISSLKLLSEELTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQ 1067

Query: 311  TPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAA 370
            T L  +Q+ +++ I+ ++ +L  I NDI+D  K +  KL++       +  + ++  + +
Sbjct: 1068 TSLDKKQQNYVEKIDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFS 1127

Query: 371  LMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQ 430
            + A  K L        ++P  +  D  RL QVL NL++NA+KFT++G V++++S +   +
Sbjct: 1128 VKAADKQLELLFAVAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSIS-QLVRE 1186

Query: 431  HAEITIE--VEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGG 488
              EI ++  V D GIG+ E ++ K+F  + Q  S     +  GTG+GLA+ +QL++LMGG
Sbjct: 1187 DEEILLKFSVRDNGIGLTEEQRGKLFQSFSQADSSTTRKYG-GTGLGLAICKQLVELMGG 1245

Query: 489  DISVNSEEGFGSTFTVTIRVPLLAEAPIEIEPQEPQTELNIFMVEDIELNITVARSLLES 548
            +I V S+ G GSTF  ++R  +     I++   +    + I + +D      + RS LES
Sbjct: 1246 EIGVESQFGNGSTFFFSVRFKVADNQLIKV--AQELEGMRILVADDNATARDILRSTLES 1303

Query: 549  MGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSLPPLVALTAN 608
            MG  V    +G EA+     T+Y +  +D ++P+M G + A    +  ++ P  + ++A+
Sbjct: 1304 MGFTVDTVRSGAEALSRCQETDYGVALIDWRMPEMDGLETARRLLSERTNPPKTLIVSAH 1363

Query: 609  VLKD-KEEYRQKGMDAAISKPLSVAAVREVI-------AKMTQHHAGESV-----AKVKS 655
               D  ++  Q  +   I+KP+S + + + I         M     G  V     A++K 
Sbjct: 1364 ADGDFIDKAEQAEISGYITKPISASRLLDGIMSALGKQGAMPVRRKGSEVSPALLAQLKG 1423

Query: 656  NKEKELPDDLYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAY-LAVLDSNMVAKDQ 714
             +   + D+   Q +  E L+  V ++ S      V L + +M ++ L ++D  M   D 
Sbjct: 1424 KRILLVEDNEMNQEVASEFLEQ-VGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDG 1482

Query: 715  EGIVSEAHK 723
                +E  K
Sbjct: 1483 YQATAELRK 1491



 Score = 70.9 bits (172), Expect = 6e-16
 Identities = 60/263 (22%), Positives = 121/263 (46%), Gaps = 21/263 (7%)

Query: 529  IFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDI 588
            I +VED E+N  VA   LE +G  +++A  G+ A++      +DLV +D Q+P M G+  
Sbjct: 1426 ILLVEDNEMNQEVASEFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQA 1485

Query: 589  AHYYRTHYSSLP-PLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVREVIAKMTQHHA 646
                R        P++A+TAN +  DKE   + GM+  I+KP+ V+ + + + +     +
Sbjct: 1486 TAELRKRPELADLPVIAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTLLEYLGDDS 1545

Query: 647  GESVAKVKSNKEKELPDDLY---QQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLA 703
             + + +  + +  +   D Y      LD++         G Q V +S  L+ +    +  
Sbjct: 1546 -QVIEETSTEQTDQHSQDAYWPQHPALDIDK--------GLQLVQNSARLYRRIFERFYT 1596

Query: 704  -------VLDSNMVAKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQKAQSPEAPAWWENIS 756
                   ++ +      QE  V  AH +KG AG++    +  +A++ +   + +   +++
Sbjct: 1597 GQSRCAELIATAQREGKQEEAVRYAHTLKGVAGNLCCPELVALAKQVEQTLSDSIEADVT 1656

Query: 757  DWVEEIKNEYQSDIALLKRWLTQ 779
            + + ++     S    +  WL+Q
Sbjct: 1657 EALTQMGELLDSLCTTIGDWLSQ 1679