Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  212 bits (539), Expect = 1e-58
 Identities = 167/548 (30%), Positives = 273/548 (49%), Gaps = 75/548 (13%)

Query: 277  EKASRDKTTFISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFN 336
            E A + K+ F++T+SHE+RTPLNG++G   +L ++ L   Q++ L     S   L  + N
Sbjct: 503  EAADKAKSLFLATMSHEIRTPLNGLLGTLTLLGESELPTAQKQMLALSQYSGALLQTVLN 562

Query: 337  DIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDS 396
            DI+D  + ++ KL   P  +   E + E+  +    A   GL   LER   LP  + +D 
Sbjct: 563  DILDFSRLEQGKLSNEPRPVAINELLDEVVSIMLAGAGNAGLSLRLER-ERLPEWINIDG 621

Query: 397  TRLRQVLWNLLSNAMKFTKEGGVVMTVSAECDAQHAEITIEVEDTGIGIPEAEQEKIFAM 456
             +LRQVL+NLL NA+KFT  G + + VS       A +   V DTG+GIPE  + ++F  
Sbjct: 622  PKLRQVLFNLLGNAIKFTPAGEICLRVS----QAGARLKFTVSDTGLGIPEDAKARLFIA 677

Query: 457  Y-YQVKSGKDNLHAVGTGIGLAVSRQLIKLMG-GD--ISVNSEEGFGSTFTVTIRVPLLA 512
            Y  Q   G+      GTG+GLA+S++L+ LMG GD  + V +E   GSTF  ++  PL A
Sbjct: 678  YSAQPNQGRSR----GTGLGLAISKELVTLMGAGDEGLWVETEVNKGSTFGFSL--PLEA 731

Query: 513  -EAPI----EIEPQEPQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFN 567
             EAP+    +I PQ       + +VED ++N+ VA+  L  +GH+V +A +  EA+  F 
Sbjct: 732  CEAPVLSATDIIPQ--VAPKRVLVVEDNQVNVMVAQGFLAHLGHEVVLAPSCAEAMAVFE 789

Query: 568  PTE--YDLVFLDIQLPDMTGFDIAHYYRTHYSSLPPLVALTANVL-KDKEEYRQKGMDAA 624
              +  +D V LDIQL D +G D+    R   +S     A TA +  +D E YR  G D  
Sbjct: 790  DKDAGFDAVMLDIQLSDGSGIDLLSQLRECAASDVLFAAFTAQLQPQDLEVYRAVGFDEI 849

Query: 625  ISKPLSVAAVREVIAKMTQHHA-----------GESVAKVKSN--------KEKELPDD- 664
            ++KPL++ A+   + + ++  A            E+  +V+S+        +E  LPDD 
Sbjct: 850  LAKPLNMQALMRWLGRASKTSAPVAEEAEDVKEKEAAERVESDETSAEVLAEENSLPDDP 909

Query: 665  ------LYQQLLDLEMLQSYVEIVGSQPVIDSVHLFEQSMPAYLAVLDSNMVAKDQEGIV 718
                  L   LLD    Q   + +G   ++  + L+  S  A L  L+  + +  ++   
Sbjct: 910  LLNDPLLDAPLLDSAQFQGDFDCLGEAAMVQMLSLYLSSSEAQLTELEQLVESTPEQKAE 969

Query: 719  SEA---------------HKIKGAAGSVGLKRIQKIAQKAQSPEAPA---------WWEN 754
             EA               H +KG++ ++G+ R+ +  Q+ +  E  A         W ++
Sbjct: 970  QEAEQAAEDKNEACRKLLHGLKGSSANMGMVRLTRRCQQLEKSELQATDICGLRQLWRDS 1029

Query: 755  ISDWVEEI 762
            ++D+  ++
Sbjct: 1030 VADFEAQL 1037