Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  207 bits (528), Expect = 2e-57
 Identities = 152/524 (29%), Positives = 249/524 (47%), Gaps = 41/524 (7%)

Query: 146 TQVELAERTAL-LRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGLTPWDVY 204
           T+   AER A    + + +S D I  +   G  +  NR  EEL G   +E+VG +   ++
Sbjct: 403 TESRQAERIARQYEAIVRSSDDAILSKTLDGIVTSWNRGAEELFGYSAAEMVGRSTLHLF 462

Query: 205 RKEIAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPFYNKDGRHLGLVGFGR 264
             E      +  +++    T   ++      DGR     +   P  + +GR LG+    R
Sbjct: 463 PPECLAEERDILERLRRGETVKHFDTRRIRKDGRIVDVSVTISPLLDGEGRVLGISKIAR 522

Query: 265 DITERK-------RHEESLEKASRDKT------------------TFISTISHELRTPLN 299
           DIT RK       RH + LE+  +++T                   F++ +SHE+RTPLN
Sbjct: 523 DITARKAAEAELQRHRQRLEELVQERTRQLEELKDAAESANVAKSAFLANMSHEIRTPLN 582

Query: 300 GIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFE 359
            + GL+ ++    L  +Q +H+  +  +A  L  + N I+D+ K +  K  L  A +  E
Sbjct: 583 AMTGLTHLIRRAGLKPQQAEHMDKLEAAAQHLLGVINAILDLSKIEAGKFALEEAPVRVE 642

Query: 360 EFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGV 419
             +  +        + KGL    E    LP  +  D TRL+Q L N   NA+KFT++G +
Sbjct: 643 SLLGNVASFLQERVQAKGLVLRTE-AQPLPPHLLGDPTRLQQALLNYAGNALKFTEQGSI 701

Query: 420 VMTV-SAECDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAV 478
            + V + E     A +  EV+DTGIGIP     K+F+ + Q  +     +  GTG+GLA+
Sbjct: 702 TLRVHTLEEGEADALLRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYG-GTGLGLAI 760

Query: 479 SRQLIKLMGGDISVNSEEGFGSTFTVTIRVPL----------LAEAPIEIEPQEPQTELN 528
           +R+L +LMGG+   +SE G GSTF  T R+            LA    E   ++      
Sbjct: 761 TRKLAQLMGGEAGASSEPGRGSTFWFTARLKKGKERYGNGAPLAGGNAEQRLRQEFAGRT 820

Query: 529 IFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDI 588
           + + ED  +N  + + +LE +G +V +A  G+ A++     +Y L+ +D+Q+P M G D 
Sbjct: 821 VLLAEDEPINQEITKFMLEDVGLRVELAPDGKVAVERARGNDYALILMDMQMPLMDGLDA 880

Query: 589 AHYYR-THYSSLPPLVALTANVL-KDKEEYRQKGMDAAISKPLS 630
               R        P++A+TAN   +DK      GM+  I+KP++
Sbjct: 881 TREIRQLQRHRQTPILAMTANAFAEDKARCLGAGMNDFIAKPVN 924