Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 955 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  209 bits (532), Expect = 6e-58
 Identities = 131/413 (31%), Positives = 226/413 (54%), Gaps = 20/413 (4%)

Query: 246 KVPFYNKDGRHLGLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPL 298
           KV  Y+++GR   +VG   DITERKR E  L       E A++ K+ F++ +SHE+RTPL
Sbjct: 527 KVVEYDEEGRPTLVVGANTDITERKRFETELRQARDDAEAANKAKSIFLANMSHEIRTPL 586

Query: 299 NGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNF 358
           NG++G+ ++L D PL+ +Q++ L   + S+  L  + NDI+D  +             + 
Sbjct: 587 NGVLGMLQLLEDAPLTSDQQELLHVASQSSRNLLTVINDILDFTRLGSVAPSFASDPFDA 646

Query: 359 EEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGG 418
              +  +    A  A+ K +R + +   ++P L+  D TR RQ+L+NL+ NA+KFT++G 
Sbjct: 647 AGALYTVRDTLATGAKDKDIRIETDISPNVPPLLIGDVTRFRQILFNLVGNAVKFTQQGT 706

Query: 419 VVMT---VSAECDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIG 475
           V ++   +     A    + + VED+GIGIP+     +F  ++QV  G       GTG+G
Sbjct: 707 VRISLHGLERHSPAGALRMLLMVEDSGIGIPQDMLGNVFEPFFQV-DGSYRRRYPGTGLG 765

Query: 476 LAVSRQLIKLMGGDISVNSEEGFGSTFTVTIRVPLLAEAPIEI-EPQEPQTELNIFMVED 534
           L + R L+  MGG I+++SEEG G+T   T+    + + P  + E  E    L + +VED
Sbjct: 766 LGIVRSLVHGMGGTIAIDSEEGAGTTIACTLMFGRIEKTPEGVTEGFETGAGLKVLVVED 825

Query: 535 IELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRT 594
             ++   A  +LE +GH   VA +  E I       +D V +DIQ+P+M G ++    R+
Sbjct: 826 DHISRVAASRMLERLGHYPVVASSAVEGIAMLRQQTFDCVLMDIQMPEMDGLELTEALRS 885

Query: 595 HYSSLP-----PLVALTANVL-KDKEEYRQKGMDAAISKPLSVAAVREVIAKM 641
               +P     P++ALTA+VL +++ ++  +G+   ++KPL +  + + + ++
Sbjct: 886 --GLVPGVEDIPVLALTAHVLTEERRDFMSRGISGYLAKPLEMDILAKALTQI 936



 Score = 52.4 bits (124), Expect = 1e-10
 Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 10/152 (6%)

Query: 139 EVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEE-LTGKRESELVG 197
           ++ +R ++Q  LA+   L+ +  D   D+++ ++ +  +   NRA+ E L    +  ++G
Sbjct: 286 DITERNRSQAALADFRNLVEAMSDNMIDMLWAKDTECRYIFANRAIRENLLHSDDERVLG 345

Query: 198 LTPWDVYRKE--------IAQSIVETDQQVFNNNTAITYEQWLEYPDGRKSFFELRKVPF 249
            T      ++          +  +++D+ V    T+  + +  +   GR    +++K P 
Sbjct: 346 RTDLHFAERQRHLGHEHTFGELCIDSDRVVLQTRTSGRFREDGKV-QGRYLMLDVQKSPL 404

Query: 250 YNKDGRHLGLVGFGRDITERKRHEESLEKASR 281
           Y++ G+ LG VG GRDIT  K  E++L ++ +
Sbjct: 405 YDRQGKLLGTVGTGRDITLLKAQEDALLRSQQ 436