Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 690 a.a., GAF/PAS-family histidine kinase/receiver protein from Caulobacter crescentus NA1000

 Score =  226 bits (577), Expect = 2e-63
 Identities = 172/545 (31%), Positives = 266/545 (48%), Gaps = 50/545 (9%)

Query: 120 EERIKAEEAREEAMADLENEVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSG 179
           EE + A EAR   +A+             +  E +  L +F D S DL+   N +G F  
Sbjct: 170 EEELAASEARARLLAE-------------QALETSRNLSNFFDVSADLLSISNMQGRFVK 216

Query: 180 CNRAMEELTGKRESELVG------LTPWDVYRKEIAQSIVETDQQVFNNNTAITYEQWLE 233
            NRA E   G     L G      L P D     +  + +E D +V  N     Y +   
Sbjct: 217 VNRAWETALGYPIEALEGVPFLPLLHPEDQQSTRVQINRIEVDDEV--NGFVNRYRR--- 271

Query: 234 YPDGRKSFFELRKVPFYNKDGRHLGLV-GFGRDITERKRHE-------ESLEKASRDKTT 285
             DG     E R         R   LV G  RD+TER R +       ++ E A+R K  
Sbjct: 272 -ADGSYCQLEWRA-------RRCDDLVFGVARDVTERLRIQAEMAEARDAAEAANRAKND 323

Query: 286 FISTISHELRTPLNGIVGLSRMLLDTPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFD 345
           F++ +SHE+RTPLNG++ L+  L +TPL+ +Q + +  I  S  TL  + +DI+D+ K +
Sbjct: 324 FLANMSHEIRTPLNGVIALAAALDETPLTSKQAEMVAMIRRSGETLERLVSDILDVSKIE 383

Query: 346 RRKLELFPAALNFEEFVAEIEVLAALMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWN 405
             ++ L P A +    V  +  +  L A++KG+   LER          DS R+ QVL N
Sbjct: 384 AGQMTLQPQAFDLGALVDGLLDVTRLRAKEKGVAVRLERSPTAAGGFLGDSVRIGQVLSN 443

Query: 406 LLSNAMKFTKEGGVVMTVSAE--CDAQHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSG 463
           L SNA+KFT +G V++ V  E   + Q A + +EVEDTG+G    + E IF  + Q  S 
Sbjct: 444 LFSNAVKFTDQGEVIVRVDVEEAGNGQAARLFVEVEDTGVGFDAEKAEMIFQRFNQADST 503

Query: 464 KDNLHAVGTGIGLAVSRQLIKLMGGDISVNSEEGFGSTFTVTI---RVPLLAEAPIEI-E 519
                  G+G+GL++S+ L+++MGG+I+  S  G GS F VT+   R  +  +A I+   
Sbjct: 504 ITRRFG-GSGLGLSISKTLVEMMGGEITAQSSPGAGSLFRVTLPLSRTQMGPDAEIDAPR 562

Query: 520 PQEPQTELNIFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQ 579
              P   L + + ED  +N  V + +LE  G  VTV   G +A++      +D+V +D+Q
Sbjct: 563 SAAPGEGLKVLLAEDHPINQRVVQLILEPCGAAVTVVENGAQAVEAMASGAFDVVLMDMQ 622

Query: 580 LPDMTGFDIAHYYRTH--YSSLPPLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVRE 636
           +P M G       R         P++ L+AN +   + E  Q G D  + KP+++AA+ +
Sbjct: 623 MPVMDGLAATRAIRAREGEGQRTPIIMLSANAMDVHRREALQAGADLHVPKPITIAALLD 682

Query: 637 VIAKM 641
            I ++
Sbjct: 683 SIGQV 687