Pairwise Alignments

Query, 785 a.a., aerobic respiration two-component sensor histidine kinase ArcB from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  198 bits (503), Expect = 2e-54
 Identities = 136/510 (26%), Positives = 255/510 (50%), Gaps = 13/510 (2%)

Query: 139  EVYQREKTQVELAERTALLRSFIDASPDLIYYRNAKGEFSGCNRAMEELTGKRESELVGL 198
            ++ +R+  + ELA   A  ++  D S   I   +AKG    CN    E  G+    L G+
Sbjct: 888  DITERKAIEEELAVSEAHFKALFDGSTIGIVNVDAKGVILDCNDQYCEDMGQTRESLCGV 947

Query: 199  TPWDVYRKEIAQSIVETDQQVFNNNTA-ITYEQWLEYPDGRKSFFELRKVPFYNKDGRHL 257
              +DV   +  ++     +++          E+    P+G   +  +     ++   +  
Sbjct: 948  PIFDVLSLQDKETAKAQFRELAEGKVDHYRGERSFIRPNGEPLWMTVNVSALFDSQKQFE 1007

Query: 258  GLVGFGRDITERKRHEESL-------EKASRDKTTFISTISHELRTPLNGIVGLSRMLLD 310
              V    D+TE K   + L       + AS+ K  F++ +SHE+RTP+N I+G+S++ L 
Sbjct: 1008 SAVVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQ 1067

Query: 311  TPLSGEQRKHLQTINVSAVTLGNIFNDIIDMDKFDRRKLELFPAALNFEEFVAEIEVLAA 370
            T L  +Q+ +++ I  ++ +L +I NDI+D  K +  KL++       +  + ++  + +
Sbjct: 1068 TALDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFS 1127

Query: 371  LMAEQKGLRFDLERLTDLPSLVEVDSTRLRQVLWNLLSNAMKFTKEGGVVMTVS-AECDA 429
              A  K L        ++P  +  DS RL QVL NL++NA+KFT+ G V+++++  E   
Sbjct: 1128 EKAAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQN 1187

Query: 430  QHAEITIEVEDTGIGIPEAEQEKIFAMYYQVKSGKDNLHAVGTGIGLAVSRQLIKLMGGD 489
                +   V D+GIG+   +Q K+F  + Q  +     +  GTG+GLA+ +QL++LMGG 
Sbjct: 1188 DDVVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYG-GTGLGLAICKQLVELMGGT 1246

Query: 490  ISVNSEEGFGSTFTVTIRVPLLAEAPIEIEPQEPQTELNIFMVEDIELNITVARSLLESM 549
            I V S+ G GSTF  T+++ + +   + +   +    + I + +D      + R+ LESM
Sbjct: 1247 IGVESQFGHGSTFYFTVKLQISSGQKLTV--AQELEGMPILVADDNATARDIMRTTLESM 1304

Query: 550  GHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDIAHYYRTHYSSLPPLVALTANV 609
            G +V    +GEEA+      EY +  +D ++P++ G + A   +      P ++ ++A+ 
Sbjct: 1305 GFRVDTVRSGEEAVTRCIQQEYAVALIDWKMPNLDGIETAKQIKQQAKKAPRILMVSAHA 1364

Query: 610  LKD-KEEYRQKGMDAAISKPLSVAAVREVI 638
             +D   +  + G+   ISKP+S + + + I
Sbjct: 1365 NQDFLSQIEELGLAGYISKPISASRLLDGI 1394



 Score = 84.0 bits (206), Expect = 7e-20
 Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 32/281 (11%)

Query: 529  IFMVEDIELNITVARSLLESMGHKVTVAMTGEEAIQGFNPTEYDLVFLDIQLPDMTGFDI 588
            I +VED E+N+ VA   LE +G  +++A  G+ A+       +DLV +D Q+P M G+  
Sbjct: 1426 ILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMDGYQA 1485

Query: 589  AHYYRTHYSSLP-PLVALTANVLK-DKEEYRQKGMDAAISKPLSVAAVREVIAKMTQHHA 646
                R        P+VA+TAN +  DKE   + GM+  I+KP+ V  + + + K    + 
Sbjct: 1486 TQALRKRPELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLLYQTLLK----YL 1541

Query: 647  GESVAKVKSNKEKELPDDLYQQL-LDLEMLQSYVEIV------GSQPVIDSVHLFEQSMP 699
            G S + V + +  +L D   + + LD E +  + E        G Q V +S  L+++S  
Sbjct: 1542 GGSASLVDNTEPSQLVDIPVKPINLDSESVVKWPEHPELDIDRGLQLVQNSTRLYQRSFD 1601

Query: 700  AYLA-------VLDSNMVAKDQEGIVSEAHKIKGAAGSVGLKRIQKIAQ----------- 741
             ++        +++  +    ++  V  AH +KG AG++   ++ ++A+           
Sbjct: 1602 RFVTSQRNVVDLINKALANDKRDDAVRMAHTLKGLAGNLSSSKLVELARQLELHLSEKSE 1661

Query: 742  -KAQSPEAPAWWENISDWVEEIKNEYQSDIALLKRWLTQQA 781
             + +  +  A   +I D +E +K +++         L+ +A
Sbjct: 1662 YQTELDQIQALVASICDAIERVKPQFEESTTSTSEQLSPEA 1702



 Score = 27.3 bits (59), Expect = 0.007
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 230 QWLE-----YPDGRKSFFELRKVPFYNKDGRHLGLVGFGRDITERKRHEESL 276
           QW+      +P+G   + E      YN DG  +   G+  DITERK  EE L
Sbjct: 849 QWVREFRYRHPNGSIRWMEAGASGHYNDDGAIIWN-GYVMDITERKAIEEEL 899