Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., Transcriptional regulatory protein ompR from Pseudomonas fluorescens FW300-N2E2

 Score =  143 bits (361), Expect = 3e-39
 Identities = 78/229 (34%), Positives = 123/229 (53%), Gaps = 2/229 (0%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           +LIV+D++  R  + +  +  G      ++G +M   L   P++L+++DI +PG +GL+L
Sbjct: 7   VLIVDDDREIRELVGNYLKKNGLRTTVVADGRQMRAFLETTPVDLIVLDIMMPGDDGLVL 66

Query: 66  ARELREQADVA--LMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMH 123
            RELR     A  ++ LT R++E D+I+GLE+GADDY+ KPF  REL  R   +L R+  
Sbjct: 67  CRELRAGKHKATPVLMLTARNDETDRIIGLEMGADDYLVKPFAARELLARINAVLRRTRM 126

Query: 124 AGTTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRA 183
                    S     F  W LD  +R L+  DG    L  +E+R L  F ++P ++  R 
Sbjct: 127 LPPNLVVTESGRLLAFGRWRLDTTARHLLDTDGTMVALSGAEYRLLRVFLDHPQRVLNRD 186

Query: 184 DLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRF 232
            LL    GR+    DR++D+ + R+R+     +  P  I T+  EGY F
Sbjct: 187 QLLNLTQGRDADLFDRSIDLLVSRLRQRLLDDAREPAYIKTVRSEGYVF 235