Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., DNA-binding transcriptional regulator TorR (RefSeq) from Shewanella amazonensis SB2B

 Score =  183 bits (464), Expect = 3e-51
 Identities = 99/238 (41%), Positives = 149/238 (62%), Gaps = 11/238 (4%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           +L+V+DE V R  LK  F  EGY V EA+NGEEM Q L+   ++L+++DINLPG +GL L
Sbjct: 5   VLVVDDEAVIRTRLKGYFSKEGYRVLEAANGEEMWQQLALAHVDLIMLDINLPGTDGLSL 64

Query: 66  ARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMHAG 125
            RELR ++DV ++ ++GRD  VD+I+GLE+GADDY+TKPF  REL +R +NLL R     
Sbjct: 65  TRELRSRSDVGIILVSGRDETVDRIVGLEMGADDYVTKPFELRELLVRVKNLLWRISLVE 124

Query: 126 TTQEEKRSV-----EKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQ 180
             +++  +      ++  F+ + L++ SR L S      KL ++EF  L+ F  +P ++ 
Sbjct: 125 KAKQQAVAAMDEGDDRIEFDDYVLELGSRKL-SRGEAVIKLTKAEFELLVAFALHPRQVL 183

Query: 181 TRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDLED 238
           +R  L+++ + R    +DRT+DV IRR+R         PE+  T+HGEGY F   + D
Sbjct: 184 SRERLMQQTSHRSEDANDRTIDVIIRRLRGKL-----NPELFVTVHGEGYLFAASVRD 236