Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., DNA-binding transcriptional regulator TorR (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (474), Expect = 2e-52
 Identities = 105/240 (43%), Positives = 148/240 (61%), Gaps = 11/240 (4%)

Query: 4   PQILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGL 63
           P +L+V+DE V R  LK  FE EGY V EA++GEEM Q  S   I+LV++DINLPG +GL
Sbjct: 8   PCVLVVDDEAVIRARLKGYFEKEGYRVLEAADGEEMWQQFSQQHIDLVMLDINLPGVDGL 67

Query: 64  LLARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMH 123
            L RELR +++V ++ +TGRD  +DKI+GLE+GADDY+TKPF  REL +R +NLL R   
Sbjct: 68  SLTRELRSRSEVGIILVTGRDEAIDKIIGLEMGADDYVTKPFELRELLVRVKNLLWRISL 127

Query: 124 AGTTQEE-----KRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGK 178
               Q++     +R  +   F  + L +NSR L S      KL ++EF  L  F  +P +
Sbjct: 128 VKKAQQQAIAELERCDDLIEFEDYSLALNSRRL-SQGEAVIKLTKAEFELLSAFVLHPQQ 186

Query: 179 IQTRADLLKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGYRFCGDLED 238
           + +R  L++  + R    +DRT+DV IRR+R    +     E+  T+HGEGY F   +ED
Sbjct: 187 VLSRERLMQLTSHRNQDVNDRTIDVIIRRLRNKLHA-----ELFVTVHGEGYLFSAKVED 241