Pairwise Alignments

Query, 238 a.a., two-component system response regulator ArcA from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  174 bits (441), Expect = 1e-48
 Identities = 92/225 (40%), Positives = 135/225 (60%), Gaps = 1/225 (0%)

Query: 6   ILIVEDEQVTRNTLKSIFEAEGYAVFEASNGEEMHQVLSDYPINLVIMDINLPGKNGLLL 65
           IL+V+D++  R  L    ++ G     A+NG EM +VL +  ++L+++D+ LPG++GL L
Sbjct: 10  ILVVDDDRDIRTLLAEYLDSNGLRTLTATNGSEMRRVLEESRVDLIVLDLTLPGEDGLTL 69

Query: 66  ARELREQADVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRSMHAG 125
            R LR  + V ++ LT R   +D+ILGLE+GADDY+ KPF PREL  R R++L R+  A 
Sbjct: 70  CRNLRATSSVPVIMLTARGEPLDRILGLEMGADDYLAKPFEPRELFARIRSVLRRT-QAL 128

Query: 126 TTQEEKRSVEKYVFNGWELDINSRSLVSPDGDSYKLPRSEFRALLHFCENPGKIQTRADL 185
                +  V    F GW LD+ +R LV+ DG    L  +EFR L  F ++P ++  R  L
Sbjct: 129 PPNMAQPDVAAMRFAGWTLDLTARHLVNRDGVVVALSGAEFRLLKVFLDHPNRVLNRDQL 188

Query: 186 LKKMTGRELKPHDRTVDVTIRRIRKHFESVSGTPEIIATIHGEGY 230
           L+   GRE  P DR+VD+ I R+R+     + TP II T+  EGY
Sbjct: 189 LELTQGRESDPFDRSVDIQISRLRQKLGDDARTPTIIKTVRNEGY 233