Pairwise Alignments

Query, 286 a.a., endonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., deoxyribonuclease IV from Rahnella sp. WP5

 Score =  376 bits (966), Expect = e-109
 Identities = 182/283 (64%), Positives = 218/283 (77%)

Query: 4   KLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKKWGF 63
           K +GAHVSA+GGV+ A +RAHE+ A AFALFTKNQRQW A PL    I  FK  C+K+G+
Sbjct: 2   KFVGAHVSAAGGVDQAVLRAHELEATAFALFTKNQRQWKAAPLPEDVIEKFKVACEKYGY 61

Query: 64  GSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVSEEA 123
            S  ILPHDSYLINLG P  E L+KSR AF+DE+ RC+QLGL+LLNFHPGSHL Q+ E+ 
Sbjct: 62  QSNQILPHDSYLINLGHPVTEALEKSREAFLDELQRCEQLGLSLLNFHPGSHLMQIEEDK 121

Query: 124 CLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKERVGVCLDTC 183
           CLA I+ES+N+A  +   V AVIENTAGQGSNLG+RFEHLA II+ VEDK RVGVC+DTC
Sbjct: 122 CLALISESLNIALDKTKGVTAVIENTAGQGSNLGFRFEHLAKIIEGVEDKSRVGVCIDTC 181

Query: 184 HTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGEIGW 243
           H FAAGYDLRT   C++TF  FE VVG  YLR MH+ND+K +  SRVDRHHSLG G IG 
Sbjct: 182 HAFAAGYDLRTAEECEKTFKHFEEVVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIGN 241

Query: 244 ECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN 286
             F +I +DARF+GIP+ILET++PDIW  EIA L+   T + +
Sbjct: 242 TVFSWIMKDARFDGIPMILETVNPDIWKDEIAWLKAQQTAEND 284